RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 CST1P01037 141 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 ACVR1BP36896 505 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 UGT2B15P54855 530 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 LSM11P83369 360 aaKnown RBP eCLIP11.67□□□□□ -0.54
CTSA-213ENST00000606782 PRKCDQ05655 676 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 TMEM225Q6GV28 225 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 ZNF544Q6NX49 715 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 PODNL1Q6PEZ8 512 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 TBPL2Q6SJ96 375 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 SLC22A25Q6T423 547 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 MBOAT2Q6ZWT7 520 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 CREB3L2Q70SY1 520 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 ABHD12BQ7Z5M8 362 aaPredicted RBP11.67□□□□□ -0.54
CTSA-213ENST00000606782 PRIMA1Q86XR5 153 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 EPHX4Q8IUS5 362 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 OR4C15Q8NGM1 316 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 OR52J3Q8NH60 311 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 ACOT11Q8WXI4 607 aaPredicted RBP11.67□□□□□ -0.54
CTSA-213ENST00000606782 EPYCQ99645 322 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 TAPBPLQ9BX59 468 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 OBP2BQ9NPH6 170 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 RASD1Q9Y272 281 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 CR1P17927 2039 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 A0A1W2PR80 420 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 SH3PXD2BA1X283 911 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 INAFM1C9JVW0 142 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 H3BNX3 289 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 TNFRSF11BO00300 401 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 TIPRLO75663 272 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 GADD45GO95257 159 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 BGLAPP02818 100 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 PCSK6P29122 969 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 RRM2P31350 389 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 RPS5P46782 204 aaKnown RBP11.66□□□□□ -0.54
CTSA-213ENST00000606782 PRPS1P60891 318 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 SPIBQ01892 262 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 SPOCK1Q08629 439 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 GK3PQ14409 553 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 SEC23BQ15437 767 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 FAM69AQ5T7M9 428 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 ZFP1Q6P2D0 407 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 B3GLCTQ6Y288 498 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 ZNF771Q7L3S4 317 aaPredicted RBP11.66□□□□□ -0.54
CTSA-213ENST00000606782 DEPDC4Q8N2C3 294 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 PIAS4Q8N2W9 510 aaPredicted RBP11.66□□□□□ -0.54
CTSA-213ENST00000606782 MUC15Q8N387 334 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 ANKK1Q8NFD2 765 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 OR10H5Q8NGA6 315 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 LIPHQ8WWY8 451 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 PYDC1Q8WXC3 89 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 FKRPQ9H9S5 495 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 NTN4Q9HB63 628 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 VNN3Q9NY84 501 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 DNAJB9Q9UBS3 223 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 GDF2Q9UK05 429 aaPredicted RBP11.66□□□□□ -0.54
CTSA-213ENST00000606782 MED31Q9Y3C7 131 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 LYVE1Q9Y5Y7 322 aa11.66□□□□□ -0.54
CTSA-213ENST00000606782 ARFGEF3Q5TH69 2177 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 A0A096LNT2 108 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 LOC102725191A0A1B0GVB3 256 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 H7C417 338 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 M0R1B8 84 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 AHSA1O95433 338 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 WNT11O96014 354 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 MT-ATP6P00846 226 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 HOXB1P14653 301 aaPredicted RBP11.65□□□□□ -0.54
CTSA-213ENST00000606782 FASP25445 335 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 PPP2R2BQ00005 443 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 MFSD13AQ14CX5 517 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 ATP6AP1Q15904 470 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 C3orf36Q3SXR2 165 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 C9orf135Q5VTT2 229 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 ZNF730Q6ZMV8 503 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 RRM2BQ7LG56 351 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 GPAT4Q86UL3 456 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 FBXL14Q8N1E6 418 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 PFN4Q8NHR9 129 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 MAGEE2Q8TD90 523 aaPredicted RBP11.65□□□□□ -0.54
CTSA-213ENST00000606782 ADAD1Q96M93 576 aaKnown RBP11.65□□□□□ -0.54
CTSA-213ENST00000606782 C1QTNF6Q9BXI9 259 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 CACNG6Q9BXT2 260 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 LINC00470Q9BZP3 86 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 REEP1Q9H902 201 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 S100A14Q9HCY8 104 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 C20orf141Q9NUB4 165 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 TMCC3Q9ULS5 477 aa11.65□□□□□ -0.54
CTSA-213ENST00000606782 ARPC4-TTLL3A0A0A6YYG9 625 aa11.64□□□□□ -0.55
CTSA-213ENST00000606782 RPL36A-HNRNPH2H7BZ11 118 aa11.64□□□□□ -0.55
CTSA-213ENST00000606782 DEAF1O75398 565 aaPredicted RBP11.64□□□□□ -0.55
CTSA-213ENST00000606782 CRLF1O75462 422 aa11.64□□□□□ -0.55
CTSA-213ENST00000606782 ZNF432O94892 652 aa11.64□□□□□ -0.55
CTSA-213ENST00000606782 CH25HO95992 272 aa11.64□□□□□ -0.55
CTSA-213ENST00000606782 FUT1P19526 365 aa11.64□□□□□ -0.55
CTSA-213ENST00000606782 PTNP21246 168 aa11.64□□□□□ -0.55
CTSA-213ENST00000606782 APOBEC3AP31941 199 aaPredicted RBP11.64□□□□□ -0.55
CTSA-213ENST00000606782 SELENOPP49908 381 aa11.64□□□□□ -0.55
CTSA-213ENST00000606782 FABP6P51161 128 aa11.64□□□□□ -0.55
CTSA-213ENST00000606782 DSCR9P59020 149 aa11.64□□□□□ -0.55
CTSA-213ENST00000606782 PPP1R8Q12972 351 aaKnown RBP11.64□□□□□ -0.55
CTSA-213ENST00000606782 ZNF74Q16587 644 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 335.7 ms