RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 KRT33AO76009 404 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 APOL3O95236 402 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 PMS2P2O95744 297 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 CSTAP01040 98 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 IGHV3-9P01782 118 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 CRYAAP02489 173 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 HNRNPCL4P0DMR1 293 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 UQCRBP14927 111 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 CPA3P15088 417 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 ZNF23P17027 643 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 IGFBP5P24593 272 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 SOX6P35712 828 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 CAPZA2P47755 286 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 NPY4RP50391 375 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 CHN2P52757 468 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 FOXA1P55317 472 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 OR2B6P58173 313 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 DNAJB13P59910 316 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 RPL38P63173 70 aaKnown RBP4.85□□□□□ -1.63
DNMT1-220ENST00000589351 MERTKQ12866 999 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 PDE7AQ13946 482 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 TOMM34Q15785 309 aaPredicted RBP4.85□□□□□ -1.63
DNMT1-220ENST00000589351 GABRA6Q16445 453 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 GALNTL6Q49A17 601 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 SYT14P1Q58G82 188 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 ATAD3BQ5T9A4 648 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 ZYG11AQ6WRX3 759 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 SYT10Q6XYQ8 523 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 TRMT10CQ7L0Y3 403 aaKnown RBP4.85□□□□□ -1.63
DNMT1-220ENST00000589351 SLC46A3Q7Z3Q1 461 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 TEX29Q8N6K0 151 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 ARIH2OSQ8N7S6 290 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 SFXN5Q8TD22 340 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 OIT3Q8WWZ8 545 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 DDIT4LQ96D03 193 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 MSI2Q96DH6 328 aaKnown RBP4.85□□□□□ -1.63
DNMT1-220ENST00000589351 ZMYND19Q96E35 227 aaPredicted RBP4.85□□□□□ -1.63
DNMT1-220ENST00000589351 ARL5BQ96KC2 179 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 FOXN4Q96NZ1 517 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 ZNF300Q96RE9 604 aaPredicted RBP4.85□□□□□ -1.63
DNMT1-220ENST00000589351 SDF2Q99470 211 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 C1QTNF6Q9BXI9 259 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 NMUR2Q9GZQ4 415 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 EML4Q9HC35 981 aaKnown RBP4.85□□□□□ -1.63
DNMT1-220ENST00000589351 SLC17A5Q9NRA2 495 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 ACER3Q9NUN7 267 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 PSMC3IPQ9P2W1 217 aaPredicted RBP4.85□□□□□ -1.63
DNMT1-220ENST00000589351 SLC25A10Q9UBX3 287 aaPredicted RBP4.85□□□□□ -1.63
DNMT1-220ENST00000589351 BAIAP2L1Q9UHR4 511 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 ATP6V1HQ9UI12 483 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 TRAPPC4Q9Y296 219 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 SLC9A8Q9Y2E8 581 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 CAB39Q9Y376 341 aaPredicted RBP4.85□□□□□ -1.63
DNMT1-220ENST00000589351 FIS1Q9Y3D6 152 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 STAB1Q9NY15 2570 aa4.85□□□□□ -1.63
DNMT1-220ENST00000589351 HEATR1Q9H583 2144 aaKnown RBP4.84□□□□□ -1.63
DNMT1-220ENST00000589351 YLPM1P49750 1951 aaKnown RBP4.84□□□□□ -1.63
DNMT1-220ENST00000589351 NPIPA5A0A0B4J1W7 369 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 RNF103-CHMP3A0A140T963 221 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 A0A1W2PR80 420 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 OR6C65A6NJZ3 312 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 ZNF716A6NP11 495 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 VWC2LB2RUY7 222 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 NPIPA7E9PJI5 369 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 G3V2L1 256 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 F2RL2O00254 374 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 SCAMP2O15127 329 aaKnown RBP4.84□□□□□ -1.63
DNMT1-220ENST00000589351 DHHO43323 396 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 SPRY1O43609 319 aaPredicted RBP4.84□□□□□ -1.63
DNMT1-220ENST00000589351 PDE5AO76074 875 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 ABHD2P08910 425 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 LINC00032P0C843 101 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 NPIPA8P0DM63 369 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 SDC1P18827 310 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 EFNA1P20827 205 aaPredicted RBP4.84□□□□□ -1.63
DNMT1-220ENST00000589351 PRPS1L1P21108 318 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 MATN1P21941 496 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 MPGP29372 298 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 SLC1A3P43003 542 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 ZNF81P51508 661 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 IDH3GP51553 393 aaPredicted RBP4.84□□□□□ -1.63
DNMT1-220ENST00000589351 SLC35A1P78382 337 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 MAD2L1Q13257 205 aaPredicted RBP4.84□□□□□ -1.63
DNMT1-220ENST00000589351 ZNF141Q15928 474 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 WHAMMP3Q1A5X7 153 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 RFTN2Q52LD8 501 aaPredicted RBP4.84□□□□□ -1.63
DNMT1-220ENST00000589351 C9orf152Q5JTZ5 239 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 PDZK1Q5T2W1 519 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 UBAP2Q5T6F2 1119 aaKnown RBP4.84□□□□□ -1.63
DNMT1-220ENST00000589351 CLEC6AQ6EIG7 209 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 KRT80Q6KB66 452 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 TMEM154Q6P9G4 183 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 CASP12Q6UXS9 341 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 RNF165Q6ZSG1 346 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 IL17RELQ6ZVW7 336 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 C16orf62Q7Z3J2 963 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.84□□□□□ -1.63
DNMT1-220ENST00000589351 DDIASQ8IXT1 998 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 OR4F15Q8NGB8 312 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 OR56B2PQ8NGI1 322 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms