RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 IFNGR1P15260 489 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 CD46P15529 392 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 SDHBP21912 280 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 GALP22466 123 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 GDF1P27539 372 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 PYCR1P32322 319 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 PEX19P40855 299 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 NAA10P41227 235 aaPredicted RBP12.36□□□□□ -0.43
TPM1-215ENST00000558868 GBX2P52951 348 aaPredicted RBP12.36□□□□□ -0.43
TPM1-215ENST00000558868 POU3F1Q03052 451 aaPredicted RBP12.36□□□□□ -0.43
TPM1-215ENST00000558868 ZNF85Q03923 595 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 MRPL28Q13084 256 aaKnown RBP12.36□□□□□ -0.43
TPM1-215ENST00000558868 MFAP5Q13361 173 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 TRAM1Q15629 374 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 SPINK14Q6IE38 97 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 LINC00696Q6ZRV3 163 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 LINC00299Q6ZSB3 139 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 VASH2Q86V25 355 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 KLBQ86Z14 1044 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 PM20D2Q8IYS1 436 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 OR6V1Q8N148 313 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 OR2M7Q8NG81 312 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 NDNFQ8TB73 568 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 FNDC8Q8TC99 324 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 DYNC2LI1Q8TCX1 351 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 SNX33Q8WV41 574 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 TM9SF4Q92544 642 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 KLHL15Q96M94 604 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 UBL7Q96S82 380 aaPredicted RBP12.36□□□□□ -0.43
TPM1-215ENST00000558868 MARCH7Q9H992 704 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 EXOSC4Q9NPD3 245 aaKnown RBP12.36□□□□□ -0.43
TPM1-215ENST00000558868 B9D1Q9UPM9 204 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 POLHQ9Y253 713 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 AHCTF1Q8WYP5 2266 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 ZZEF1O43149 2961 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 A0A0G2JMM0 328 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 A0A1W2PPB8 328 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 A0A1W2PRS3 328 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 KIR3DP1A8MWS1 328 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 KLRC4-KLRK1H3BQV0 150 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 H7C1C5 153 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 J3QLW9 94 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 TRAPPC6AO75865 159 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 CLPXO76031 633 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 TFP02787 698 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 HLA-DPB1P04440 258 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 TACSTD2P09758 323 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 NR2C1P13056 603 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 ZNF19P17023 458 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 CRYBB2P43320 205 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 B3GALT5-AS1P59052 145 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 LCN6P62502 163 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 FOXK1P85037 733 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 FOXO1Q12778 655 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 DYNC1I2Q13409 638 aaKnown RBP12.35□□□□□ -0.43
TPM1-215ENST00000558868 CAMK2BQ13554 666 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 CDONQ4KMG0 1287 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 PDSS1Q5T2R2 415 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 SLC25A25Q6KCM7 469 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 PLEKHG7Q6ZR37 379 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 VASH1Q7L8A9 365 aaPredicted RBP12.35□□□□□ -0.43
TPM1-215ENST00000558868 FAM83FQ8NEG4 500 aaPredicted RBP12.35□□□□□ -0.43
TPM1-215ENST00000558868 C4orf36Q96KX1 117 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 ADAD1Q96M93 576 aaKnown RBP12.35□□□□□ -0.43
TPM1-215ENST00000558868 SFXN2Q96NB2 322 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 SIGLEC12Q96PQ1 595 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 RBP7Q96R05 134 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 INTS14Q96SY0 518 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 NUAK2Q9H093 628 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 TSPAN10Q9H1Z9 355 aaPredicted RBP12.35□□□□□ -0.43
TPM1-215ENST00000558868 DEPPQ9NTK1 212 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 GSTK1Q9Y2Q3 226 aa12.35□□□□□ -0.43
TPM1-215ENST00000558868 EML6Q6ZMW3 1958 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 TLX3O43711 291 aaPredicted RBP12.34□□□□□ -0.43
TPM1-215ENST00000558868 NME2P1O60361 137 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 SELENOFO60613 162 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 SLC16A7O60669 478 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 KHDRBS3O75525 346 aaKnown RBP12.34□□□□□ -0.43
TPM1-215ENST00000558868 GPX5O75715 221 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 OPN1LWP04000 364 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 SP1P08047 785 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 HLA-DOBP13765 273 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 ZNF43P17038 809 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 CELP19835 753 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 NME2P22392 152 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 SHC1P29353 583 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 SOX6P35712 828 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 CD79BP40259 229 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 P2RY4P51582 365 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 GPR85P60893 370 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 GLO1Q04760 184 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 MELKQ14680 651 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 TBC1D25Q3MII6 688 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 ESPNLQ6ZVH7 1005 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 ASB18Q6ZVZ8 466 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 YRDCQ86U90 279 aaKnown RBP12.34□□□□□ -0.43
TPM1-215ENST00000558868 CDC20BQ86Y33 519 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 SULF2Q8IWU5 870 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 TIGD4Q8IY51 512 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 KDM8Q8N371 416 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms