RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 MACROD2A1Z1Q3 448 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 LRRD1A4D1F6 860 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 TLCD2A6NGC4 264 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 DPM1O60762 260 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 POP7O75817 140 aaKnown RBP2.14□□□□□ -2.07
SCFD1-219ENST00000556413 CDK14O94921 469 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 DUSP14O95147 198 aaKnown RBP2.14□□□□□ -2.07
SCFD1-219ENST00000556413 AGTP01019 485 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 UQCRHP07919 91 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 SLC35E2P0CK97 266 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 TPBGLP0DKB5 382 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 UGT2B7P16662 529 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 IDSP22304 550 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 UCP1P25874 307 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 PSMB5P28074 263 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 HTR1EP28566 365 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 PEBP1P30086 187 aaKnown RBP2.14□□□□□ -2.07
SCFD1-219ENST00000556413 RORAP35398 523 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 BDKRB1P46663 353 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 OR1D4P47884 311 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 CSNK1DP48730 415 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 MARCKSL1P49006 195 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 EFNA3P52797 238 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 MFAP2P55001 183 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 LINC00315P59091 139 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 KLHL30Q0D2K2 578 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 HSPA14Q0VDF9 509 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 TSTA3Q13630 321 aaPredicted RBP2.14□□□□□ -2.07
SCFD1-219ENST00000556413 DPYSL2Q16555 572 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 KBTBD12Q3ZCT8 623 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 GPRC6AQ5T6X5 926 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 SEL1L2Q5TEA6 688 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 PRAMEF8Q5VWM4 474 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 KCTD11Q693B1 232 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 COX15Q7KZN9 410 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 APTXQ7Z2E3 356 aaKnown RBP2.14□□□□□ -2.07
SCFD1-219ENST00000556413 GLT6D1Q7Z4J2 308 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 SYVN1Q86TM6 617 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 OOSP2Q86WS3 158 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 ZNF677Q86XU0 584 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 IQCKQ8N0W5 287 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 CLYBLQ8N0X4 340 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 RPRMLQ8N4K4 120 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 TRAM1L1Q8N609 369 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 MLKLQ8NB16 471 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 OR52E1Q8NGJ3 308 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 OR5AR1Q8NGP9 310 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 OR13C4Q8NGS5 318 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 UBE2Q2Q8WVN8 375 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 ITLN2Q8WWU7 325 aaPredicted RBP2.14□□□□□ -2.07
SCFD1-219ENST00000556413 NAP1L5Q96NT1 182 aaPredicted RBP2.14□□□□□ -2.07
SCFD1-219ENST00000556413 TRIB3Q96RU7 358 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 SMR3AQ99954 134 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 FICDQ9BVA6 458 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 CARD9Q9H257 536 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 ELL3Q9HB65 397 aaPredicted RBP2.14□□□□□ -2.07
SCFD1-219ENST00000556413 ZNF160Q9HCG1 818 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 SLC40A1Q9NP59 571 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 SEC14L4Q9UDX3 406 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 PRODH2Q9UF12 536 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 KLHL21Q9UJP4 597 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 ATP6V1DQ9Y5K8 247 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 CRYBG3Q68DQ2 2970 aa2.14□□□□□ -2.07
SCFD1-219ENST00000556413 ANKRD17O75179 2603 aaKnown RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 A0A087X0T9 212 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 GLYATL1P3A0A0U1RQE8 302 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 NKX2-6A6NCS4 301 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 ZNF860A6NHJ4 632 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 IQCF5A8MTL0 148 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 C21orf140B9A014 251 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 C9J4A7 227 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 E7EQ34 232 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 PSMD11O00231 422 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 CCL21O00585 134 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 KMOO15229 486 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 MAGEB4O15481 346 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 PSMD3O43242 534 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 ZW10O43264 779 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 TSPAN2O60636 221 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 CRCPO75575 148 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 OR2B3O76000 313 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 SBK2P0C263 348 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 SLC35G4P0C7Q5 338 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 FAM228BP0C875 321 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 CT45A8P0DMV1 189 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 CT45A9P0DMV2 189 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 LAMP1P11279 417 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 COX6B1P14854 86 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 CPA3P15088 417 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 FERP16591 822 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 XRCC1P18887 633 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 MAGP20916 626 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 PRDX3P30048 256 aaKnown RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 SPAM1P38567 509 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 PPP1R2P41236 205 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 TDGF1P3P51864 188 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 ARHGDIAP52565 204 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 RIPPLY3P57055 190 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 VSX2P58304 361 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 UBE2HP62256 183 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 338.7 ms