RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 ZNF74Q16587 644 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 ANKDD1AQ495B1 522 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 C6orf52Q5T4I8 152 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 TUBA1AQ71U36 451 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 LINGO2Q7L985 606 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 RRM2BQ7LG56 351 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 NANOGNBQ7Z5D8 188 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 ARPINQ7Z6K5 226 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 MDP1Q86V88 176 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 PRIMA1Q86XR5 153 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 CDK20Q8IZL9 346 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 C10orf111Q8N326 155 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 ZNF786Q8N393 782 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 SLC22A24Q8N4F4 322 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 VANGL1Q8TAA9 524 aaPredicted RBP5.65□□□□□ -1.5
FOXN3-205ENST00000553904 UBASH3BQ8TF42 649 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 C11orf40Q8WZ69 217 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 HTRA1Q92743 480 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 HPS1Q92902 700 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 TMEM54Q969K7 222 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 FOXN4Q96NZ1 517 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 MOGAT1Q96PD6 335 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 SORCS2Q96PQ0 1159 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 TMEM120AQ9BXJ8 343 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 MED29Q9NX70 200 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 TAS2R5Q9NYW4 299 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 EIF3KQ9UBQ5 218 aaKnown RBP5.65□□□□□ -1.5
FOXN3-205ENST00000553904 REV1Q9UBZ9 1251 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 SEC14L4Q9UDX3 406 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 SLC7A7Q9UM01 511 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 MED31Q9Y3C7 131 aa5.65□□□□□ -1.5
FOXN3-205ENST00000553904 RAI1Q7Z5J4 1906 aaPredicted RBP5.64□□□□□ -1.51
FOXN3-205ENST00000553904 C2CD3Q4AC94 2353 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 HEATR5AQ86XA9 2040 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 LOC100289279A0A1B0GTE1 492 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 ELOVL7A1L3X0 281 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 VWC2LB2RUY7 222 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 MRASO14807 208 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 DHHO43323 396 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 GMNNO75496 209 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 OR5F1O95221 314 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 STAMBPO95630 424 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 TGFAP01135 160 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 HLA-HP01893 362 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 ADRA2AP08913 450 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 QDPRP09417 244 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 ASAH2BP0C7U1 165 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 ZNF35P13682 527 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 ANPEPP15144 967 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 ZNF14P17017 642 aaPredicted RBP5.64□□□□□ -1.51
FOXN3-205ENST00000553904 ZNF23P17027 643 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 GIFP27352 417 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 CALCRP30988 508 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 KDELR2P33947 212 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 GIPRP48546 466 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 TMEM33P57088 247 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 SELENOWP63302 87 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 TEKQ02763 1124 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 KRTAP1-1Q07627 177 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 KLF10Q13118 480 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 SCGB2A2Q13296 93 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 SNTB2Q13425 540 aaKnown RBP5.64□□□□□ -1.51
FOXN3-205ENST00000553904 TBC1D28Q2M2D7 210 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 LIPNQ5VXI9 398 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 KRT80Q6KB66 452 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 ARL9Q6T311 187 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 NHLRC1Q6VVB1 395 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 SLC16A14Q7RTX9 510 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 RETREG3Q86VR2 466 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 COMTD1Q86VU5 262 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 CARM1Q86X55 608 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 SKA3Q8IX90 412 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 ALDH16A1Q8IZ83 802 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 RNF113BQ8IZP6 322 aaKnown RBP5.64□□□□□ -1.51
FOXN3-205ENST00000553904 TEX29Q8N6K0 151 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 GPR32P1Q8NGA4 272 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 RP9Q8TA86 221 aaKnown RBP5.64□□□□□ -1.51
FOXN3-205ENST00000553904 C10orf82Q8WW14 230 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 TMEM239Q8WW34 195 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 LIPHQ8WWY8 451 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 MRPL24Q96A35 216 aaKnown RBP5.64□□□□□ -1.51
FOXN3-205ENST00000553904 ZNF837Q96EG3 531 aaPredicted RBP5.64□□□□□ -1.51
FOXN3-205ENST00000553904 SGTBQ96EQ0 304 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 RBP7Q96R05 134 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 HOPXQ9BPY8 73 aaPredicted RBP5.64□□□□□ -1.51
FOXN3-205ENST00000553904 ZNF426Q9BUY5 554 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 BCL2L14Q9BZR8 327 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 NDEL1Q9GZM8 345 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 NELFAQ9H3P2 528 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 ZNF385DQ9H6B1 395 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 EFCAB1Q9HAE3 211 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 SMURF2Q9HAU4 748 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 CDH20Q9HBT6 801 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 NOX3Q9HBY0 568 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 CCNB1IP1Q9NPC3 277 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 INIPQ9NRY2 104 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 SLCO1C1Q9NYB5 712 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 SLC7A8Q9UHI5 535 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 RIMS3Q9UJD0 308 aa5.64□□□□□ -1.51
FOXN3-205ENST00000553904 TEP1Q99973 2627 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms