RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 RBMXP38159 391 aaKnown RBP9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 MAGEB1P43366 347 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 PCBP3P57721 371 aaKnown RBP9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 RUNX1T1Q06455 604 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 MELKQ14680 651 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 TRMT5Q32P41 509 aaKnown RBP9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 RUNDC3AQ59EK9 446 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 BEND6Q5SZJ8 279 aaPredicted RBP9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 C5orf46Q6UWT4 87 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 DEF8Q6ZN54 512 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 C1orf229Q6ZS94 237 aaPredicted RBP9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 PXKQ7Z7A4 578 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 CROCCP2Q86T23 111 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 RETREG3Q86VR2 466 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 ARMC8Q8IUR7 673 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 IL17RDQ8NFM7 739 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 OR5J2Q8NH18 312 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 OR6S1Q8NH40 331 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 TMEM54Q969K7 222 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 THOC1Q96FV9 657 aaKnown RBP9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 C7orf26Q96N11 449 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 ARHGDIGQ99819 225 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 TMEM43Q9BTV4 400 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 ASPNQ9BXN1 380 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 OR51B6Q9H340 312 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 ZNF275Q9NSD4 429 aaPredicted RBP9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 DUSP13Q9UII6 198 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 NOX1Q9Y5S8 564 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 CPSF4LA6NMK7 179 aaKnown RBP9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 VSTM5A8MXK1 200 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 M0QX08 132 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 KPNA4O00629 521 aaPredicted RBP9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 POLR3GO15318 223 aaPredicted RBP9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 AKAP8O43823 692 aaKnown RBP9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 RP2O75695 350 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 CH25HO95992 272 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 AVPP01185 164 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 C8BP07358 591 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 FAM157BP0CG42 384 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 CSNK1A1P48729 337 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 EVX1P49640 407 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 CRYBA2P53672 197 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 DVL1P1P54792 670 aaPredicted RBP9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 MTPNP58546 118 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 STX1BP61266 288 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 NCALDP61601 193 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 LMO4P61968 165 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 TMEM255AQ5JRV8 349 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 ENTPD8Q5MY95 495 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 SLC35D2Q76EJ3 337 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 KRT73Q86Y46 540 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 RFLNBQ8N5W9 214 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 HIPK4Q8NE63 616 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 VANGL1Q8TAA9 524 aaPredicted RBP9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 EPYCQ99645 322 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 SPATA5L1Q9BVQ7 753 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 METTL17Q9H7H0 456 aaPredicted RBP9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 MOV10Q9HCE1 1003 aaKnown RBP9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 GLTPQ9NZD2 209 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 DOCK11Q5JSL3 2073 aa9.89□□□□□ -0.83
PRPF40B-212ENST00000551111 TCF21O43680 179 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 CDC14BO60729 498 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 ERLIN1O75477 346 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 SERPINA5P05154 406 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 ERCC1P07992 297 aaPredicted RBP9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 CD247P20963 164 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 GPR6P46095 362 aaPredicted RBP9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 MYBPC1Q00872 1141 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 ZNF74Q16587 644 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 GKAP1Q5VSY0 366 aaPredicted RBP9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 LIPNQ5VXI9 398 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 THSD4Q6ZMP0 1018 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 SLC22A24Q8N4F4 322 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 ADAMTS16Q8TE57 1224 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 TAMM41Q96BW9 452 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 ZNF607Q96SK3 696 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 PRSS27Q9BQR3 290 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 CCDC28BQ9BUN5 200 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 B3GAT2Q9NPZ5 323 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 MEPEQ9NQ76 525 aaPredicted RBP9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 TMEM38BQ9NVV0 291 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 HIF1ANQ9NWT6 349 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 SELENONQ9NZV5 590 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 TAAR3PQ9P1P4 343 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 FBXO9Q9UK97 447 aaPredicted RBP9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 CACNG2Q9Y698 323 aa9.88□□□□□ -0.83
PRPF40B-212ENST00000551111 PRORSD1PA6NEY8 169 aa9.87□□□□□ -0.83
PRPF40B-212ENST00000551111 EVPLLA8MZ36 301 aa9.87□□□□□ -0.83
PRPF40B-212ENST00000551111 B4DSR2 109 aa9.87□□□□□ -0.83
PRPF40B-212ENST00000551111 PPIHO43447 177 aaKnown RBP9.87□□□□□ -0.83
PRPF40B-212ENST00000551111 RNF13O43567 381 aa9.87□□□□□ -0.83
PRPF40B-212ENST00000551111 CHP2O43745 196 aa9.87□□□□□ -0.83
PRPF40B-212ENST00000551111 SERPINB7O75635 380 aa9.87□□□□□ -0.83
PRPF40B-212ENST00000551111 TGDSO95455 350 aa9.87□□□□□ -0.83
PRPF40B-212ENST00000551111 RAB36O95755 333 aa9.87□□□□□ -0.83
PRPF40B-212ENST00000551111 QDPRP09417 244 aa9.87□□□□□ -0.83
PRPF40B-212ENST00000551111 ASAH2BP0C7U1 165 aa9.87□□□□□ -0.83
PRPF40B-212ENST00000551111 PGA4P0DJD7 388 aa9.87□□□□□ -0.83
PRPF40B-212ENST00000551111 PGA3P0DJD8 388 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms