RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 PDLIM3Q53GG5 364 aaPredicted RBP14.02□□□□□ -0.17
DDX55-212ENST00000544738 PHYHD1Q5SRE7 291 aa14.02□□□□□ -0.17
DDX55-212ENST00000544738 VHLLQ6RSH7 139 aa14.02□□□□□ -0.17
DDX55-212ENST00000544738 ZNF813Q6ZN06 617 aa14.02□□□□□ -0.17
DDX55-212ENST00000544738 HIST3H2AQ7L7L0 130 aa14.02□□□□□ -0.17
DDX55-212ENST00000544738 MDP1Q86V88 176 aa14.02□□□□□ -0.17
DDX55-212ENST00000544738 OR8J3Q8NGG0 315 aa14.02□□□□□ -0.17
DDX55-212ENST00000544738 VANGL1Q8TAA9 524 aaPredicted RBP14.02□□□□□ -0.17
DDX55-212ENST00000544738 HIST1H2ACQ93077 130 aa14.02□□□□□ -0.17
DDX55-212ENST00000544738 TAMM41Q96BW9 452 aa14.02□□□□□ -0.17
DDX55-212ENST00000544738 SORCS2Q96PQ0 1159 aa14.02□□□□□ -0.17
DDX55-212ENST00000544738 SEC61A2Q9H9S3 476 aa14.02□□□□□ -0.17
DDX55-212ENST00000544738 NANSQ9NR45 359 aa14.02□□□□□ -0.17
DDX55-212ENST00000544738 B3GNT2Q9NY97 397 aa14.02□□□□□ -0.17
DDX55-212ENST00000544738 ARFGEF3Q5TH69 2177 aa14.02□□□□□ -0.17
DDX55-212ENST00000544738 LOC390937A0A1W2PQ73 354 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 BBIP1A8MTZ0 92 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 C11orf98E9PRG8 122 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 ENTPD5O75356 428 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 SERPINI2O75830 405 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 SASH3O75995 380 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 SEC14L2O76054 403 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 CH25HO95992 272 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 IFNA14P01570 189 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 ERCC1P07992 297 aaPredicted RBP14.01□□□□□ -0.17
DDX55-212ENST00000544738 CELA3BP08861 270 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 CSNK1A1P48729 337 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 GZMMP51124 257 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 ARFIP2P53365 341 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 BIDP55957 195 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 ACTG1P63261 375 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 MAPRE2Q15555 327 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 CARTPTQ16568 116 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 ZNF74Q16587 644 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 IQCCQ4KMZ1 466 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 ERICH5Q6P6B1 374 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 SLC35D2Q76EJ3 337 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 RBM45Q8IUH3 476 aaKnown RBP14.01□□□□□ -0.17
DDX55-212ENST00000544738 OR6X1Q8NH79 312 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 LRRC58Q96CX6 371 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 FOXB1Q99853 325 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 PIMREGQ9BSJ6 248 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 ZNF426Q9BUY5 554 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 RAB1BQ9H0U4 201 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 ZNF229Q9UJW7 825 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 FBXL3Q9UKT7 428 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 BAG5Q9UL15 447 aa14.01□□□□□ -0.17
DDX55-212ENST00000544738 ZNF503-AS2A6NEH8 195 aa14□□□□□ -0.17
DDX55-212ENST00000544738 RNF13O43567 381 aa14□□□□□ -0.17
DDX55-212ENST00000544738 LYPD3O95274 346 aa14□□□□□ -0.17
DDX55-212ENST00000544738 HLA-HP01893 362 aa14□□□□□ -0.17
DDX55-212ENST00000544738 THY1P04216 161 aa14□□□□□ -0.17
DDX55-212ENST00000544738 CD79AP11912 226 aa14□□□□□ -0.17
DDX55-212ENST00000544738 IFNGR1P15260 489 aa14□□□□□ -0.17
DDX55-212ENST00000544738 THBS4P35443 961 aa14□□□□□ -0.17
DDX55-212ENST00000544738 NR4A2P43354 598 aa14□□□□□ -0.17
DDX55-212ENST00000544738 DAG1Q14118 895 aa14□□□□□ -0.17
DDX55-212ENST00000544738 RABL3Q5HYI8 236 aa14□□□□□ -0.17
DDX55-212ENST00000544738 WDR88Q6ZMY6 472 aa14□□□□□ -0.17
DDX55-212ENST00000544738 PIWIL3Q7Z3Z3 882 aaKnown RBP14□□□□□ -0.17
DDX55-212ENST00000544738 MYPOPQ86VE0 399 aaPredicted RBP14□□□□□ -0.17
DDX55-212ENST00000544738 CALHM3Q86XJ0 350 aa14□□□□□ -0.17
DDX55-212ENST00000544738 PCYOX1LQ8NBM8 494 aa14□□□□□ -0.17
DDX55-212ENST00000544738 ZNF540Q8NDQ6 660 aa14□□□□□ -0.17
DDX55-212ENST00000544738 OR4D11Q8NGI4 311 aa14□□□□□ -0.17
DDX55-212ENST00000544738 POLR2J2Q9GZM3 115 aaKnown RBP14□□□□□ -0.17
DDX55-212ENST00000544738 POLR2J3Q9H1A7 115 aaKnown RBP14□□□□□ -0.17
DDX55-212ENST00000544738 NOX3Q9HBY0 568 aa14□□□□□ -0.17
DDX55-212ENST00000544738 TAS2R5Q9NYW4 299 aa14□□□□□ -0.17
DDX55-212ENST00000544738 GLTPQ9NZD2 209 aa14□□□□□ -0.17
DDX55-212ENST00000544738 SH3GLB1Q9Y371 365 aa14□□□□□ -0.17
DDX55-212ENST00000544738 SPEF1Q9Y4P9 236 aa14□□□□□ -0.17
DDX55-212ENST00000544738 IGHV4-61A0A0C4DH41 118 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 VWC2LB2RUY7 222 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 hCG_2039718K7EN88 272 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 MRASO14807 208 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 UBL3O95164 117 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 VENTXO95231 258 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 UMPSP11172 480 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 B4GALT1P15291 398 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 NR4A1P22736 598 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 KLF10Q13118 480 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 SPATA21Q7Z572 469 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 ANKS4BQ8N8V4 417 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 NEU4Q8WWR8 484 aaPredicted RBP13.99□□□□□ -0.17
DDX55-212ENST00000544738 GCDHQ92947 438 aaPredicted RBP13.99□□□□□ -0.17
DDX55-212ENST00000544738 TMEM54Q969K7 222 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 ZNF566Q969W8 418 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 SLC25A44Q96H78 314 aaPredicted RBP13.99□□□□□ -0.17
DDX55-212ENST00000544738 FOXN4Q96NZ1 517 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 FGFR1OP2Q9NVK5 253 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 GID8Q9NWU2 228 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 TMEFF2Q9UIK5 374 aaPredicted RBP13.99□□□□□ -0.17
DDX55-212ENST00000544738 CMAHPQ9Y471 501 aa13.99□□□□□ -0.17
DDX55-212ENST00000544738 FXYD1O00168 92 aa13.98□□□□□ -0.17
DDX55-212ENST00000544738 KPNA4O00629 521 aaPredicted RBP13.98□□□□□ -0.17
DDX55-212ENST00000544738 RAB36O95755 333 aa13.98□□□□□ -0.17
DDX55-212ENST00000544738 MT-ND1P03886 318 aa13.98□□□□□ -0.17
DDX55-212ENST00000544738 ASAH2BP0C7U1 165 aa13.98□□□□□ -0.17
DDX55-212ENST00000544738 ZNF14P17017 642 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms