RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 S100PBPQ96BU1 408 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 MUS81Q96NY9 551 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 WFIKKN1Q96NZ8 548 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 POLDIP3Q9BY77 421 aaKnown RBP17.09■□□□□ 0.33
DDX55-207ENST00000540763 MRPL13Q9BYD1 178 aaKnown RBP17.09■□□□□ 0.33
DDX55-207ENST00000540763 GPR35Q9HC97 309 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 NRIP3Q9NQ35 241 aa17.09■□□□□ 0.33
DDX55-207ENST00000540763 CIB4A0PJX0 185 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 A6NIZ1 184 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 OR5H1A6NKK0 313 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 E2F6O75461 281 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 TIPRLO75663 272 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 ACADSP16219 412 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 FASP25445 335 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 RPL4P36578 427 aaKnown RBP17.08■□□□□ 0.32
DDX55-207ENST00000540763 ARHGDIAP52565 204 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 RAP1BP61224 184 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 RAP1AP62834 184 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 PPP1R8Q12972 351 aaKnown RBP17.08■□□□□ 0.32
DDX55-207ENST00000540763 SNTB1Q13884 538 aaKnown RBP17.08■□□□□ 0.32
DDX55-207ENST00000540763 GABRA6Q16445 453 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 HIST3H3Q16695 136 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 GPR139Q6DWJ6 353 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 CD300LDQ6UXZ3 194 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 DPY19L2P2Q6ZN68 376 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 ZNF620Q6ZNG0 422 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 RASSF6Q6ZTQ3 369 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 WDFY1Q8IWB7 410 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 ZNF519Q8TB69 540 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 MAGEE2Q8TD90 523 aaPredicted RBP17.08■□□□□ 0.32
DDX55-207ENST00000540763 BDH2Q9BUT1 245 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 ALG12Q9BV10 488 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 KATNB1Q9BVA0 655 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 ULBP2Q9BZM5 246 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 OR52D1Q9H346 318 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 CRLF2Q9HC73 371 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 OBP2BQ9NPH6 170 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 GLTPQ9NZD2 209 aa17.08■□□□□ 0.32
DDX55-207ENST00000540763 ZNF99A8MXY4 864 aaPredicted RBP17.07■□□□□ 0.32
DDX55-207ENST00000540763 AHCYL1O43865 530 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 TRMUO75648 421 aaKnown RBP17.07■□□□□ 0.32
DDX55-207ENST00000540763 RAD51DO75771 328 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 GASTP01350 101 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 HOXB1P14653 301 aaPredicted RBP17.07■□□□□ 0.32
DDX55-207ENST00000540763 CRYGSP22914 178 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 PAX7P23759 505 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 SSTR2P30874 369 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 SLC6A6P31641 620 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 ZNF133P52736 654 aaPredicted RBP17.07■□□□□ 0.32
DDX55-207ENST00000540763 FOXG1P55316 489 aaPredicted RBP17.07■□□□□ 0.32
DDX55-207ENST00000540763 CLRN1P58418 232 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 LGALS3BPQ08380 585 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 COX10Q12887 443 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 TSC22D1Q15714 1073 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 RFX4Q33E94 735 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 CARD17Q5XLA6 110 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 SHQ1Q6PI26 577 aaKnown RBP17.07■□□□□ 0.32
DDX55-207ENST00000540763 ZNF627Q7L945 461 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 ARIH2OSQ8N7S6 290 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 OR1K1Q8NGR3 316 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 TSPAN32Q96QS1 320 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 KCNK17Q96T54 332 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 SMURF2Q9HAU4 748 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 NTN4Q9HB63 628 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 GRHPRQ9UBQ7 328 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 ZNF346Q9UL40 294 aaKnown RBP17.07■□□□□ 0.32
DDX55-207ENST00000540763 CDH10Q9Y6N8 788 aa17.07■□□□□ 0.32
DDX55-207ENST00000540763 FAM221AA4D161 298 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 M0R3G1 203 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 IMPA2O14732 288 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 CASKO14936 926 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 TXNDC12O95881 172 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 SDHAP31040 664 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 RPS6KA3P51812 740 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 IST1P53990 364 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 TOP3AQ13472 1001 aaPredicted RBP17.06■□□□□ 0.32
DDX55-207ENST00000540763 CEACAM16Q2WEN9 425 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 PHYHD1Q5SRE7 291 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 ANKRD16Q6P6B7 361 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 THSD4Q6ZMP0 1018 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 TMEM179BQ7Z7N9 219 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 IGFN1Q86VF2 1251 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 ZNF295-AS1Q8N0V1 137 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 DNAJC9Q8WXX5 260 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 MUCL1Q96DR8 90 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 ZNF570Q96NI8 536 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 DENND2DQ9H6A0 471 aaPredicted RBP17.06■□□□□ 0.32
DDX55-207ENST00000540763 IL20Q9NYY1 176 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 PDP1Q9P0J1 537 aaPredicted RBP17.06■□□□□ 0.32
DDX55-207ENST00000540763 AMDHD2Q9Y303 409 aa17.06■□□□□ 0.32
DDX55-207ENST00000540763 A6NNC1 897 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 ARPC3O15145 178 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 ENTPD5O75356 428 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 THBDP07204 575 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 ANXA8P13928 327 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 HOXC12P31275 282 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 ACVR1BP36896 505 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 RUNX1T1Q06455 604 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 TAB1Q15750 504 aa17.05■□□□□ 0.32
DDX55-207ENST00000540763 NRN1LQ496H8 165 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms