RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 CLLU1OSQ5K130 101 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 C9orf135Q5VTT2 229 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 ZNF595Q8IYB9 648 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 C1orf87Q8N0U7 546 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 CLDN22Q8N7P3 220 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 SLC6A18Q96N87 628 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 WDR76Q9H967 626 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 PSORS1C1Q9UIG5 152 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 F6UZH7 168 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 PPP6CO00743 305 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 TIMM8AO60220 97 aaPredicted RBP9.21□□□□□ -0.93
COL4A6-208ENST00000538570 TCRBP04435 133 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 EIF4EP06730 217 aaKnown RBP9.21□□□□□ -0.93
COL4A6-208ENST00000538570 CR2P20023 1033 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 FGF7P21781 194 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 AADACP22760 399 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 CLDN12P56749 244 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 RUNX2Q13950 521 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 ZNF266Q14584 549 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 ESPNLQ6ZVH7 1005 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 RNF175Q8N4F7 328 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 OR5M8Q8NGP6 311 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 CDCA3Q99618 268 aaPredicted RBP9.21□□□□□ -0.93
COL4A6-208ENST00000538570 SELENOIQ9C0D9 397 aa9.21□□□□□ -0.93
COL4A6-208ENST00000538570 MYADML2A6NDP7 307 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 TRIM77I1YAP6 450 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 M0R143 59 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 UBL3O95164 117 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 NSA2O95478 260 aaKnown RBP9.21□□□□□ -0.94
COL4A6-208ENST00000538570 HLA-HP01893 362 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF865P0CJ78 1059 aaPredicted RBP9.21□□□□□ -0.94
COL4A6-208ENST00000538570 CEBPBP17676 345 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 BLVRBP30043 206 aaPredicted RBP9.21□□□□□ -0.94
COL4A6-208ENST00000538570 RAB13P51153 203 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 RAB38P57729 211 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 ERV3-1Q14264 604 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 PKDCCQ504Y2 493 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 SPRED1Q7Z699 444 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 UBAC2Q8NBM4 344 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 OR1S2Q8NGQ3 325 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 ABHD4Q8TB40 342 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 DYRK2Q92630 601 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 HLA-CQ95604 372 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 ESRP2Q9H6T0 727 aaKnown RBP9.21□□□□□ -0.94
COL4A6-208ENST00000538570 SLC22A11Q9NSA0 550 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 NRXN3Q9Y4C0 1643 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.21□□□□□ -0.94
COL4A6-208ENST00000538570 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.21□□□□□ -0.94
COL4A6-208ENST00000538570 LAP3P28838 519 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 ECI1P42126 302 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 TNFRSF4P43489 277 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 WNT7BP56706 349 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 GGTA1PQ4G0N0 100 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 C9orf152Q5JTZ5 239 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 PHYHD1Q5SRE7 291 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 Q6ZTK2 550 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 HTR3DQ70Z44 454 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 GCNT2Q8N0V5 402 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 TMEM40Q8WWA1 233 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 HSD17B8Q92506 261 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 GHSRQ92847 366 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 EGLN2Q96KS0 407 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF251Q9BRH9 671 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 PBX4Q9BYU1 374 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 GNG12Q9UBI6 72 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 KLK4Q9Y5K2 254 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 ARL2-SNX15V9GYD0 113 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 MYH11P35749 1972 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 MYH2Q9UKX2 1941 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 PVRP15151 417 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 CD46P15529 392 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 NAGAP17050 411 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 Q499Y3 187 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 C4orf17Q53FE4 359 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 SLC35D2Q76EJ3 337 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 PRSS42Q7Z5A4 293 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 MISPQ8IVT2 679 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 OR1J2Q8NGS2 313 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 OR13C9Q8NGT0 318 aa9.21□□□□□ -0.94
COL4A6-208ENST00000538570 MYH7P12883 1935 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 A0A087X0M5 115 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 A0A1B0GX30 115 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF320A2RRD8 509 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 SMIM18P0DKX4 95 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 ABOP16442 354 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 ANXA7P20073 488 aaKnown RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 ITGB8P26012 769 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 NXNL2Q5VZ03 156 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 Q6ZPB1 254 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 MDGA2Q7Z553 956 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 SAT2Q96F10 170 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-208ENST00000538570 HHIPQ96QV1 700 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 FAM234AQ9H0X4 552 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 TM7SF3Q9NS93 570 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 LHX6Q9UPM6 363 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 SHC1P29353 583 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 HOXC13P31276 330 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 RBPJQ06330 500 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 STEAP1BQ6NZ63 245 aa9.2□□□□□ -0.94
COL4A6-208ENST00000538570 PPP1R3BQ86XI6 285 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms