RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 DLEU7Q6UYE1 221 aa16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 LINC00114Q6XXX2 140 aa16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 C11orf65Q8NCR3 313 aa16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 CPPED1Q9BRF8 314 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 INTS9Q9NV88 658 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 C11orf98E9PRG8 122 aa16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 M0R3H8 397 aa16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 CHP2O43745 196 aa16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 LSP1P33241 339 aa16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 SRP14P37108 136 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 CDH15P55291 814 aa16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 PCBP3P57721 371 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 RBBP4Q09028 425 aa16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 PIWIL3Q7Z3Z3 882 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 C1orf159Q96HA4 380 aa16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ARHGDIGQ99819 225 aa16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 SYT3Q9BQG1 590 aa16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 RABEP2Q9H5N1 569 aa16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 TENM1Q9UKZ4 2725 aa16.93■□□□□ 0.3
TNFRSF1B-204ENST00000536782 M0QX08 132 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 OPN1SWP03999 348 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 CCNIQ14094 377 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 RAB39AQ14964 217 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 FXNQ16595 210 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 DUSP7Q16829 419 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 CYP51A1Q16850 503 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 REP15Q6BDI9 236 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 SLC35D2Q76EJ3 337 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 PTOV1Q86YD1 416 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 RFLNBQ8N5W9 214 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 OR6X1Q8NH79 312 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 TMEM54Q969K7 222 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 GLTPQ9NZD2 209 aa16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 LEF1Q9UJU2 399 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1B-204ENST00000536782 CPSF4LA6NMK7 179 aaKnown RBP16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 TCF21O43680 179 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ENTPD5O75356 428 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 CH25HO95992 272 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 TCN1P20061 433 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 PCMT1P22061 227 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ALDH3B1P43353 468 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 SEC24CP53992 1094 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 DVL1P1P54792 670 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ZP4Q12836 540 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ZNF74Q16587 644 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ENTPD8Q5MY95 495 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ELFN2Q5R3F8 820 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 TTC33Q6PID6 262 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 DHDDSQ86SQ9 333 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 LRP11Q86VZ4 500 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 SKA3Q8IX90 412 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 OR6T1Q8NGN1 323 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 MAGEB18Q96M61 343 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 TAS2R5Q9NYW4 299 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 SLC7A8Q9UHI5 535 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 NDUFAF1Q9Y375 327 aa16.91■□□□□ 0.3
TNFRSF1B-204ENST00000536782 B4DSR2 109 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 HAX1O00165 279 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 RNF13O43567 381 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 HPXP02790 462 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 SERPINA5P05154 406 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 PATE4P0C8F1 98 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 OR8G3PP0DMU2 310 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ACHEP22303 614 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 GPR6P46095 362 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 NPTX1Q15818 432 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 WDR88Q6ZMY6 472 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 SLC22A24Q8N4F4 322 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 GPR32P1Q8NGA4 272 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ADAMTS16Q8TE57 1224 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 RDH5Q92781 318 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ZNF566Q969W8 418 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 SLC25A44Q96H78 314 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 CGREF1Q99674 301 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 NANSQ9NR45 359 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 DUSP13Q9UII6 198 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 FZR1Q9UM11 496 aa16.9■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ANGPT2O15123 496 aa16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 FARS2O95363 451 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 COL8A2P25067 703 aa16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 MTPNP58546 118 aa16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SELPLGQ14242 412 aa16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 MAD2L1BPQ15013 274 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 PATL1Q86TB9 770 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 RBM45Q8IUH3 476 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 ZNF584Q8IVC4 421 aa16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SLC30A8Q8IWU4 369 aa16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 DPP10Q8N608 796 aa16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 VANGL1Q8TAA9 524 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 FGFBP3Q8TAT2 258 aa16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 STON2Q8WXE9 905 aa16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 TMEM38BQ9NVV0 291 aa16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 MYEF2Q9P2K5 600 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 ZNF229Q9UJW7 825 aa16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 ZNF346Q9UL40 294 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SLC7A7Q9UM01 511 aa16.89■□□□□ 0.29
TNFRSF1B-204ENST00000536782 A0A1W2PPW3 197 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 TRAPPC13A5PLN9 417 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 KPNA4O00629 521 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 DHHO43323 396 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms