RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 HSD11B1LQ7Z5J1 315 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 CEACAM19Q7Z692 300 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 LCA5Q86VQ0 697 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 TMEM17Q86X19 198 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 ZNF440Q8IYI8 595 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 OR4D9Q8NGE8 314 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 OR6T1Q8NGN1 323 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 FLVCR1-AS1Q8TAF5 88 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 M1APQ8TC57 530 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 ITLN1Q8WWA0 313 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 RPL3LQ92901 407 aaKnown RBP3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 CEP170P1Q96L14 293 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 MYCBPQ99417 103 aaPredicted RBP3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 SOSTQ9BQB4 213 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 CCDC94Q9BW85 323 aaPredicted RBP3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 UCK2Q9BZX2 261 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 POLR1EQ9GZS1 481 aaKnown RBP3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 GORASP2Q9H8Y8 452 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 ELOVL3Q9HB03 270 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 KCNJ16Q9NPI9 418 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 MEPEQ9NQ76 525 aaPredicted RBP3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 TIGARQ9NQ88 270 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 FBXO8Q9NRD0 319 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 SMPD3Q9NY59 655 aaPredicted RBP3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 SMC3Q9UQE7 1217 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 EIF3LQ9Y262 564 aaKnown RBP3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 ANKRD36A6QL64 1941 aa3.8□□□□□ -1.8
SSX2IP-208ENST00000490476 ANKRD12Q6UB98 2062 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 IGHV3OR16-12A0A075B7B8 117 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 GSAPA4D1B5 854 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 ACOD1A6NK06 481 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 POLR1CO15160 346 aaPredicted RBP3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 TM9SF1O15321 606 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 COCHO43405 550 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 LCMT2O60294 686 aaKnown RBP3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 GALR3O60755 368 aaPredicted RBP3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 RENP00797 406 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 MELTFP08582 738 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 SNRPCP09234 159 aaKnown RBP3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 FAM200BP0CF97 657 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 GLRA2P23416 452 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 CA5AP35218 305 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 DRD3P35462 400 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 RPL4P36578 427 aaKnown RBP3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 ACVR1BP36896 505 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 BDKRB1P46663 353 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 GNPDA1P46926 289 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 CBX1P83916 185 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 SPIBQ01892 262 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 IL18R1Q13478 541 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 PEX6Q13608 980 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 IHHQ14623 411 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 ELOCQ15369 112 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 PPP1R3AQ16821 1122 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 GLIPR1L2Q4G1C9 344 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 FILIP1LQ4L180 1135 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 TPRG1LQ5T0D9 272 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 SEL1L3Q68CR1 1132 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 PMF1Q6P1K2 205 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 CCBE1Q6UXH8 406 aaPredicted RBP3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 ZSCAN4Q8NAM6 433 aaPredicted RBP3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 OR52M1Q8NGK5 317 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 NANPQ8TBE9 248 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 FNDC8Q8TC99 324 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 SPRYD4Q8WW59 207 aaPredicted RBP3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 ZBED6CLQ96FA7 236 aaPredicted RBP3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 SENP8Q96LD8 212 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 GNB4Q9HAV0 340 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 AMBNQ9NP70 447 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 DHRS4-AS1Q9P1J3 65 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 ANAPC7Q9UJX3 599 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 LSM7Q9UK45 103 aaKnown RBP3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 MRPS33Q9Y291 106 aaKnown RBP3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 GSTK1Q9Y2Q3 226 aa3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 MRPS7Q9Y2R9 242 aaKnown RBP3.79□□□□□ -1.8
SSX2IP-208ENST00000490476 TRAV9-2A0A087WT02 112 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 LRRIQ4A6NIV6 560 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 SAP18O00422 153 aaKnown RBP3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 ZSCAN12O43309 604 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 EFNA2O43921 213 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 IGHV3-13P01766 116 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 CALM1P0DP23 149 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 CALM2P0DP24 149 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 CALM3P0DP25 149 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 PTBP1P26599 531 aaKnown RBP eCLIP3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 OTX2P32243 289 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 ARHGDIBP52566 201 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 PLA2G16P53816 162 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 EWSR1Q01844 656 aaKnown RBP eCLIP3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 BDH1Q02338 343 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 PUDPQ08623 228 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 CHIT1Q13231 466 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 ATXN7L3Q14CW9 347 aaPredicted RBP3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 TATDN3Q17R31 274 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 SNAI3Q3KNW1 292 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 SLC22A6Q4U2R8 563 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 FAM182AQ5T1J6 154 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 ANKRD37Q7Z713 158 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 TMEM110Q86TL2 294 aa3.78□□□□□ -1.8
SSX2IP-208ENST00000490476 PAQR7Q86WK9 346 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms