RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 IFNGR1P15260 489 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 IDH3GP51553 393 aaPredicted RBP12.49□□□□□ -0.41
CLDN11-207ENST00000486975 BIDP55957 195 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 HGFACQ04756 655 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 CAMK2DQ13557 499 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 GSG1Q2KHT4 349 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 ZNF813Q6ZN06 617 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 SLC35D2Q76EJ3 337 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 SLC46A3Q7Z3Q1 461 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 ARPINQ7Z6K5 226 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 MYPOPQ86VE0 399 aaPredicted RBP12.49□□□□□ -0.41
CLDN11-207ENST00000486975 WDFY1Q8IWB7 410 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 ZNF525Q8N782 197 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 RP9Q8TA86 221 aaKnown RBP12.49□□□□□ -0.41
CLDN11-207ENST00000486975 C10orf105Q8TEF2 133 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 LIPHQ8WWY8 451 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 NANOS1Q8WY41 292 aaKnown RBP12.49□□□□□ -0.41
CLDN11-207ENST00000486975 FAM168AQ92567 244 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 TMEM54Q969K7 222 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 ZNF75AQ96N20 296 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 FOXB1Q99853 325 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 PLK3Q9H4B4 646 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 FBXL3Q9UKT7 428 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 POFUT2Q9Y2G5 429 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 FKBP7Q9Y680 259 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 ARFGEF3Q5TH69 2177 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 CR1P17927 2039 aa12.49□□□□□ -0.41
CLDN11-207ENST00000486975 VSTM5A8MXK1 200 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 C11orf98E9PRG8 122 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 NDUFS8O00217 210 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 KPNA4O00629 521 aaPredicted RBP12.48□□□□□ -0.41
CLDN11-207ENST00000486975 RNF13O43567 381 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 CRLF1O75462 422 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 SERPINI2O75830 405 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 SEC14L2O76054 403 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 MT-ND1P03886 318 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 HIST1H2ABP04908 130 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 TSPAN19P0C672 248 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 KDELR2P33947 212 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 CAPZA2P47755 286 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 PPOXP50336 477 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 TAS2R41P59536 307 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 HIST3H2AQ7L7L0 130 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 PIWIL3Q7Z3Z3 882 aaKnown RBP12.48□□□□□ -0.41
CLDN11-207ENST00000486975 NANOGNBQ7Z5D8 188 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 LRRC17Q8N6Y2 441 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 OR2T12Q8NG77 320 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 HTRA1Q92743 480 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 HIST1H2ACQ93077 130 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 ZNF566Q969W8 418 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 SLC25A44Q96H78 314 aaPredicted RBP12.48□□□□□ -0.41
CLDN11-207ENST00000486975 SORCS2Q96PQ0 1159 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 MYOZ1Q9NP98 299 aaPredicted RBP12.48□□□□□ -0.41
CLDN11-207ENST00000486975 GLTPQ9NZD2 209 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 ZNF224Q9NZL3 707 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 RIMS3Q9UJD0 308 aa12.48□□□□□ -0.41
CLDN11-207ENST00000486975 ELOVL7A1L3X0 281 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 HTR3EA5X5Y0 456 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 NPIPB13A6NJU9 1138 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 CENPBD1B2RD01 187 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 NPIPB4C9JG80 1138 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 UBL3O95164 117 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 HLA-HP01893 362 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 PGA4P0DJD7 388 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 PGA3P0DJD8 388 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 B4GALT1P15291 398 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 ZNF14P17017 642 aaPredicted RBP12.47□□□□□ -0.41
CLDN11-207ENST00000486975 NPR2P20594 1047 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 MDH1P40925 334 aaKnown RBP12.47□□□□□ -0.41
CLDN11-207ENST00000486975 VLDLRP98155 873 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 NPRL3Q12980 569 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 HIST3H3Q16695 136 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 NRN1LQ496H8 165 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 CYBRD1Q53TN4 286 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 DEF8Q6ZN54 512 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 NKAIN4Q8IVV8 208 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 MICU2Q8IYU8 434 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 RCN3Q96D15 328 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 TNFRSF13CQ96RJ3 184 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 SEPHS2Q99611 448 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 NOX3Q9HBY0 568 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 ARMCX1Q9P291 453 aa12.47□□□□□ -0.41
CLDN11-207ENST00000486975 VWC2LB2RUY7 222 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 CCDC22O60826 627 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 OR7A10O76100 309 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 BCL10O95999 233 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 UMPSP11172 480 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 ZNF35P13682 527 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 TNFRSF1BP20333 461 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 NR4A1P22736 598 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 THBS4P35443 961 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 UGT2B15P54855 530 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 SELENOWP63302 87 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 SF3A3Q12874 501 aaKnown RBP eCLIP12.46□□□□□ -0.41
CLDN11-207ENST00000486975 PIN1Q13526 163 aaPredicted RBP12.46□□□□□ -0.41
CLDN11-207ENST00000486975 TMEM249Q2WGJ8 235 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 LRRC23Q53EV4 343 aaPredicted RBP12.46□□□□□ -0.41
CLDN11-207ENST00000486975 LRFN4Q6PJG9 635 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 HDDC2Q7Z4H3 204 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 DPPA2Q7Z7J5 298 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms