RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ALDH3A2P51648 485 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 FOXG1P55316 489 aaPredicted RBP11.69□□□□□ -0.54
HDAC1-208ENST00000482310 PPP2R2BQ00005 443 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 SLC34A1Q06495 639 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 FMODQ06828 376 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 COX10Q12887 443 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 MESTQ5EB52 335 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 KDM4DQ6B0I6 523 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 RPL13AP3Q6NVV1 102 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 ZNF474Q6S9Z5 364 aaPredicted RBP11.69□□□□□ -0.54
HDAC1-208ENST00000482310 DPY19L2P2Q6ZN68 376 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 JAZF1Q86VZ6 243 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 ZNF808Q8N4W9 903 aaPredicted RBP11.69□□□□□ -0.54
HDAC1-208ENST00000482310 FAM26EQ8N5C1 309 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 SDR9C7Q8NEX9 313 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 NOXO1Q8NFA2 376 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 OR4K13Q8NH42 304 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 SSC4DQ8WTU2 575 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 NSMAFQ92636 917 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 ZNF566Q969W8 418 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 OTULINQ96BN8 352 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 RBM24Q9BX46 236 aaKnown RBP11.69□□□□□ -0.54
HDAC1-208ENST00000482310 PIGMQ9H3S5 423 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 FANCFQ9NPI8 374 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 PARPBPQ9NWS1 579 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 RCE1Q9Y256 329 aa11.69□□□□□ -0.54
HDAC1-208ENST00000482310 LRRK2Q5S007 2527 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 MGRN1O60291 552 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 LYZL6O75951 148 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 ZNF432O94892 652 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 CLDN14O95500 239 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 SLC2A10O95528 541 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 ALPLP05186 524 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 PGA4P0DJD7 388 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 PGA3P0DJD8 388 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 CD8BP10966 210 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 HIST1H1CP16403 213 aaKnown RBP11.68□□□□□ -0.54
HDAC1-208ENST00000482310 GRNP28799 593 aaKnown RBP11.68□□□□□ -0.54
HDAC1-208ENST00000482310 EPHA2P29317 976 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 SDHAP31040 664 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 POLR2IP36954 125 aaKnown RBP11.68□□□□□ -0.54
HDAC1-208ENST00000482310 ASCL1P50553 236 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 CRISP1P54107 249 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 GINS1Q14691 196 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 PGGHGQ32M88 737 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 SLC25A35Q3KQZ1 300 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 ARMC4Q5T2S8 1044 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 FBXW10Q5XX13 1052 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 LEG1Q6P5S2 330 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 CD300LDQ6UXZ3 194 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 NHLRC1Q6VVB1 395 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 PTCHD4Q6ZW05 846 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 LINGO2Q7L985 606 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 FAM122BQ7Z309 247 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 CXorf67Q86X51 503 aaPredicted RBP11.68□□□□□ -0.54
HDAC1-208ENST00000482310 TMEM123Q8N131 208 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 CYB561A3Q8NBI2 242 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 OR2T33Q8NG76 320 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 OR52E2Q8NGJ4 325 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 OR6X1Q8NH79 312 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 LILRB4Q8NHJ6 448 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 ZNF519Q8TB69 540 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 HTRA1Q92743 480 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 SLC25A44Q96H78 314 aaPredicted RBP11.68□□□□□ -0.54
HDAC1-208ENST00000482310 ADAD1Q96M93 576 aaKnown RBP11.68□□□□□ -0.54
HDAC1-208ENST00000482310 FOXN4Q96NZ1 517 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 GPX7Q96SL4 187 aaPredicted RBP11.68□□□□□ -0.54
HDAC1-208ENST00000482310 ULBP2Q9BZM5 246 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 KCNJ16Q9NPI9 418 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 NRIP3Q9NQ35 241 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 PLSCR4Q9NRQ2 329 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 GALNT8Q9NY28 637 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 IL20Q9NYY1 176 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 PRR14LQ5THK1 2151 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 NBPF19A0A087WUL8 3843 aa11.68□□□□□ -0.54
HDAC1-208ENST00000482310 USP9YO00507 2555 aaPredicted RBP11.67□□□□□ -0.54
HDAC1-208ENST00000482310 ZNF587BE7ETH6 402 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 BHLHE40O14503 412 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 MSTNO14793 375 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 SNAP29O95721 258 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 CENPAP49450 140 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 ROR2Q01974 943 aaKnown RBP11.67□□□□□ -0.54
HDAC1-208ENST00000482310 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.67□□□□□ -0.54
HDAC1-208ENST00000482310 FAM27E3Q08E93 113 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 FBXW9Q5XUX1 488 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 HIST2H2BCQ6DN03 193 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 ALKBH2Q6NS38 261 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 ACSM5Q6NUN0 579 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 SLC27A4Q6P1M0 643 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 XKRXQ6PP77 449 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 HDDC2Q7Z4H3 204 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 C20orf196Q8IYI0 205 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 ARIH2OSQ8N7S6 290 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 NRG4Q8WWG1 115 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 DNAJC9Q8WXX5 260 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 ZNF837Q96EG3 531 aaPredicted RBP11.67□□□□□ -0.54
HDAC1-208ENST00000482310 NMNAT3Q96T66 252 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 TOR3AQ9H497 397 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 CRLF2Q9HC73 371 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 B3GAT2Q9NPZ5 323 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms