RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ZNF433Q8N7K0 673 aaPredicted RBP3□□□□□ -1.93
SMNDC1-205ENST00000477763 Q8N9L7 120 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 SPATA4Q8NEY3 305 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 GEMIN6Q8WXD5 167 aaKnown RBP3□□□□□ -1.93
SMNDC1-205ENST00000477763 PIBF1Q8WXW3 757 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 MED8Q96G25 268 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 SH3GL3Q99963 347 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 RARRES2Q99969 163 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 HDHD3Q9BSH5 251 aaPredicted RBP3□□□□□ -1.93
SMNDC1-205ENST00000477763 TM9SF3Q9HD45 589 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 GNPTGQ9UJJ9 305 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 IGKV6D-21A0A0A0MT36 114 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 FAM47DPA6NHR8 397 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 FAM25EA8MYX2 175 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 GOSR2O14653 212 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 WBP4O75554 376 aaKnown RBP2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 PBLDP30039 288 aaPredicted RBP2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 TNNT2P45379 298 aaPredicted RBP2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 UCNP55089 124 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 KRTAP10-8P60410 259 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 SGCAQ16586 387 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 VPS26BQ4G0F5 336 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 RNASEKQ6P5S7 137 aaKnown RBP2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 FAM228AQ86W67 206 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 CDR2LQ86X02 465 aaPredicted RBP2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 ENTHD1Q8IYW4 607 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 DUSP18Q8NEJ0 188 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 KCNG3Q8TAE7 436 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 GPR151Q8TDV0 419 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 SGK3Q96BR1 496 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 AURKBQ96GD4 344 aaPredicted RBP2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 OSBPL10Q9BXB5 764 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 CTPS2Q9NRF8 586 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 PSMC3IPQ9P2W1 217 aaPredicted RBP2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 WSB1Q9Y6I7 421 aa2.99□□□□□ -1.93
SMNDC1-205ENST00000477763 ASTN1O14525 1302 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 A0A0B4J2A0 478 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 IGHV3-64DA0A0J9YX35 117 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 HEATR9A2RTY3 570 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 PRSS37A4D1T9 235 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 ERVV-1B6SEH8 477 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 ICOSLGO75144 302 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 EIF3GO75821 320 aaKnown RBP eCLIP2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 CST1P01037 141 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 SMIM10L1P0DMW3 83 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 IGHV3-43DP0DP04 118 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 CCR8P51685 355 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 SUCLG1P53597 346 aaKnown RBP2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 HERVK_113P61574 105 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 IFT88Q13099 833 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 PRPSAP1Q14558 356 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 PSG5Q15238 335 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 GUCA2BQ16661 112 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 TMEM183BQ1AE95 376 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 TMEM255AQ5JRV8 349 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 CCDC183Q5T5S1 534 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 TIFABQ6ZNK6 161 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 TMEM183AQ8IXX5 376 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 OR52K2Q8NGK3 314 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 PLPPR1Q8TBJ4 325 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 SRSF12Q8WXF0 261 aaKnown RBP2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 TMEM158Q8WZ71 300 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 RASD2Q96D21 266 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 ASB9Q96DX5 294 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 SMIM10Q96HG1 83 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 CNDP1Q96KN2 507 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 GPR61Q9BZJ8 451 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 ILKAPQ9H0C8 392 aaPredicted RBP2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 DMAP1Q9NPF5 467 aaPredicted RBP2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 SHPKQ9UHJ6 478 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 PRO0461Q9UI25 63 aa2.98□□□□□ -1.93
SMNDC1-205ENST00000477763 LTBP1Q14766 1721 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 TMX2-CTNND1H3BSU7 103 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 AP3B1O00203 1094 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 RTL8CO15255 209 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 KLHL41O60662 606 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 SUPT3HO75486 399 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 BGLAPP02818 100 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 PLEKP08567 350 aaPredicted RBP2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 HOXC4P09017 264 aaPredicted RBP2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 UQCRFS1P1P0C7P4 283 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 ZDHHC11BP0C7U3 371 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 CNR1P21554 472 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 AK4P27144 223 aaPredicted RBP2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 HOXA9P31269 272 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 CCR6P51684 374 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 FGF8P55075 233 aaPredicted RBP2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 GPX6P59796 221 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 RPS21P63220 83 aaKnown RBP2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 HMGCS1Q01581 520 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 ZNF92Q03936 586 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 REG3AQ06141 175 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 GGTLC2Q14390 218 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 C19orf35Q6ZS72 473 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 TMEM179Q6ZVK1 233 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 OTUD6AQ7L8S5 288 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 CDH26Q8IXH8 852 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 MREGQ8N565 214 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 OR56B2PQ8NGI1 322 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 RHEBL1Q8TAI7 183 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 227.7 ms