RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ZNF443Q9Y2A4 671 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-204ENST00000474025 WIPI2Q9Y4P8 454 aa4.36□□□□□ -1.71
SNRNP40-204ENST00000474025 CACNG2Q9Y698 323 aa4.36□□□□□ -1.71
SNRNP40-204ENST00000474025 hCG_2014768A0A024R1R8 64 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 IGKV1D-42A0A075B6H8 117 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 PPIAL4EA0A075B759 164 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 PPIAL4CA0A0B4J2A2 164 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 IGHV1-69-2A0A0G2JMI3 117 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 E9PBE3 544 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 PPIAL4DF5H284 164 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 CLDN34H7C241 214 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 AKAP8O43823 692 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 UBL3O95164 117 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 RAB36O95755 333 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 HPRP00739 348 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 SERPINA5P05154 406 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 H2AFB1P0C5Y9 115 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 H2AFB2P0C5Z0 115 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 PATE4P0C8F1 98 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 PPIAL4FP0DN26 164 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 HLA-DOBP13765 273 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 MDKP21741 143 aaPredicted RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 GRPRP30550 384 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 GCH1P30793 250 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 CDKN2CP42773 168 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 CRYBB2P43320 205 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 RAD52P43351 418 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 ANXA11P50995 505 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 MVDP53602 400 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 CLNS1AP54105 237 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 KLF3P57682 345 aaPredicted RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 ERVS71-1P61550 626 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 LCN2P80188 198 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 HOXC5Q00444 222 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 TEKQ02763 1124 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 BAMBIQ13145 260 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 RAB39AQ14964 217 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 LARS2Q15031 903 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 DPY19L1Q2PZI1 675 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 KLF17Q5JT82 389 aaPredicted RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 FAM69AQ5T7M9 428 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 CARD17Q5XLA6 110 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 RGS7BPQ6MZT1 257 aaPredicted RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 LEG1Q6P5S2 330 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 C6orf89Q6UWU4 347 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 NHLRC1Q6VVB1 395 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 USP51Q70EK9 711 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 H1FNTQ75WM6 255 aaPredicted RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF771Q7L3S4 317 aaPredicted RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 JAZF1Q86VZ6 243 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 TREML1Q86YW5 311 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 UEVLDQ8IX04 471 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 IFT20Q8IY31 132 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 LRRC34Q8IZ02 419 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 BCL6BQ8N143 479 aaPredicted RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 PAQR4Q8N4S7 273 aaPredicted RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 TRIML2Q8N7C3 387 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 ADPRHL1Q8NDY3 354 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 MNS1Q8NEH6 495 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 FGFBP3Q8TAT2 258 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 SYNPRQ8TBG9 265 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 SNX33Q8WV41 574 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 GTF3AQ92664 365 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 POP5Q969H6 163 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 SLC25A28Q96A46 364 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 TIMD4Q96H15 378 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 TEX37Q96LM6 180 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 PPP1R36Q96LQ0 422 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 C16orf45Q96MC5 204 aaPredicted RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 PANX1Q96RD7 426 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 FOXB1Q99853 325 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 GAL3ST1Q99999 423 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 EMC6Q9BV81 110 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 ULBP2Q9BZM5 246 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 PPCSQ9HAB8 311 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 SAP30LQ9HAJ7 183 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 SLCO1C1Q9NYB5 712 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 PLEK2Q9NYT0 353 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 KLHL14Q9P2G3 628 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 P2RX2Q9UBL9 471 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF69Q9UC07 566 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 BTNL2Q9UIR0 455 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 FBXL3Q9UKT7 428 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 NUP50Q9UKX7 468 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 POFUT2Q9Y2G5 429 aa4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 DYNC2H1Q8NCM8 4307 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-204ENST00000474025 TRAV36DV7A0A075B6V5 113 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 A0A087WUJ7 227 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SLC22A23A1A5C7 686 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 MS4A18H0YCH9 400 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 OR2T1O43869 369 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF500O60304 480 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 MFN2O95140 757 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SNAP29O95721 258 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 BCHEP06276 602 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 BPGMP07738 259 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 ALDOCP09972 364 aaKnown RBP4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 CCL2P13500 99 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 ETFAP13804 333 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms