RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 GSTK1Q9Y2Q3 226 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 CBY1Q9Y3M2 126 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 SAMHD1Q9Y3Z3 626 aaKnown RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 NUBP2Q9Y5Y2 271 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 COL4A1P02462 1669 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 TCF20Q9UGU0 1960 aaKnown RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 LTBP1Q14766 1721 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 XIRP1Q702N8 1843 aaKnown RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 PHIPQ8WWQ0 1821 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 C7orf66A4D0T2 115 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ARGFXA6NJG6 315 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 C5orf58C9J3I9 102 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 PRSS46E5RG02 174 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 E9PAM4 449 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 NPIPA3F8WFD2 350 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 L7N2F9 121 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 CCL24O00175 119 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 UPK1AO00322 258 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 PDHXO00330 501 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC28A1O00337 649 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 PHYHO14832 338 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 CASC3O15234 703 aaKnown RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 CHP2O43745 196 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SSNA1O43805 119 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 RAD1O60671 282 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 DPM1O60762 260 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SEC22BO75396 215 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 WBP4O75554 376 aaKnown RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SC5DO75845 299 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ANXA9O76027 345 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 AP2A2O94973 939 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC16A8O95907 504 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 PAK4O96013 591 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 FBP1P09467 338 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 CSF3P09919 207 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 FAM157CP0CG43 387 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 UBBP0CG47 229 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 UBCP0CG48 685 aaKnown RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 UROSP10746 265 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ODC1P11926 461 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 F3P13726 295 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 CD1EP15812 388 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 TSPAN8P19075 237 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 MAPK3P27361 379 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 RBMS1P29558 406 aaKnown RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 GGT2P36268 569 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 CSRP3P50461 194 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 NR0B1P51843 470 aaKnown RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 RAG2P55895 527 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ST8SIA6P61647 398 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 AP1S1P61966 158 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 RPS27AP62979 156 aaKnown RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 UBA52P62987 128 aaKnown RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 CRADDP78560 199 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 DEFA6Q01524 100 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SPP2Q13103 211 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 IL18Q14116 193 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 GK2Q14410 553 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 TEAD2Q15562 447 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 CHRNA6Q15825 494 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF79Q15937 498 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SSX2Q16385 188 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 RNF212Q495C1 297 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 IQCCQ4KMZ1 466 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 Q5BKY6 102 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF789Q5FWF6 425 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF678Q5SXM1 525 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 AVPI1Q5T686 147 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 KDM4DQ6B0I6 523 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR2T5Q6IEZ7 315 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR6B2Q6IFH4 312 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 FAM53AQ6NSI3 398 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 UQCC3Q6UW78 93 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 PRSS55Q6UWB4 352 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 C5orf46Q6UWT4 87 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 TMEM207Q6UWW9 146 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 NHLRC1Q6VVB1 395 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 C3P1Q6ZMU1 363 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 FAM183BPQ6ZVS7 135 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 USP50Q70EL3 339 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 LHFPL3Q86UP9 236 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZDHHC21Q8IVQ6 265 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 PDZD9Q8IXQ8 264 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC22A15Q8IZD6 547 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC34A3Q8N130 599 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 PRSS35Q8N3Z0 413 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 LIX1Q8N485 282 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF557Q8N988 423 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR2T4Q8NH00 348 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR2T29Q8NH02 315 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR1L3Q8NH93 324 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 FAM110BQ8TC76 370 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 RXFP2Q8WXD0 754 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ARNTL2Q8WYA1 636 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ACOT12Q8WYK0 555 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 UCN3Q969E3 161 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC25A46Q96AG3 418 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SNRNP40Q96DI7 357 aaKnown RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 FCRL1Q96LA6 429 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 KCTD7Q96MP8 289 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms