RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 RAB39AQ14964 217 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 EFNB3Q15768 340 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 LRRC23Q53EV4 343 aaPredicted RBP8.04□□□□□ -1.12
NUP50-206ENST00000422489 CYBRD1Q53TN4 286 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 CGB2Q6NT52 195 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 ERICH5Q6P6B1 374 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 NANOGNBQ7Z5D8 188 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 HIPK1Q86Z02 1210 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 SKA3Q8IX90 412 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 POU5F2Q8N7G0 328 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 NUP37Q8NFH4 326 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 OR6X1Q8NH79 312 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 PFN4Q8NHR9 129 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 TMEM54Q969K7 222 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 SGTBQ96EQ0 304 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 SLC25A44Q96H78 314 aaPredicted RBP8.04□□□□□ -1.12
NUP50-206ENST00000422489 DOK1Q99704 481 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 MDFIQ99750 246 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 SH3GL3Q99963 347 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 PRSS27Q9BQR3 290 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 PIMREGQ9BSJ6 248 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 NOX3Q9HBY0 568 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 MEPEQ9NQ76 525 aaPredicted RBP8.04□□□□□ -1.12
NUP50-206ENST00000422489 MRGBPQ9NV56 204 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 ZNF229Q9UJW7 825 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 CAPN7Q9Y6W3 813 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 USF3Q68DE3 2245 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 ROS1P08922 2347 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 VPS13CQ709C8 3753 aa8.04□□□□□ -1.12
NUP50-206ENST00000422489 ZNF469Q96JG9 3925 aaPredicted RBP8.04□□□□□ -1.12
NUP50-206ENST00000422489 LOC390937A0A1W2PQ73 354 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 A0A1W2PRG6 482 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 TMEM129A0AVI4 362 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 MCIDASD6RGH6 385 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 FXYD1O00168 92 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 GSTA4O15217 222 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 DHHO43323 396 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 PDE5AO76074 875 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 OR7A10O76100 309 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 UBL3O95164 117 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 IFNA2P01563 188 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 MT-ND1P03886 318 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 ADRA2AP08913 450 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 DAOP14920 347 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 TCN1P20061 433 aaPredicted RBP8.03□□□□□ -1.12
NUP50-206ENST00000422489 NR4A1P22736 598 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 IFNA8P32881 189 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 LSP1P33241 339 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 AQP2P41181 271 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 NR4A2P43354 598 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 YAP1P46937 504 aaKnown RBP8.03□□□□□ -1.12
NUP50-206ENST00000422489 CRYBA2P53672 197 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 UGT2B15P54855 530 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 VLDLRP98155 873 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 GALK2Q01415 458 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 LAPTM4AQ15012 233 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 CHRFAM7AQ494W8 412 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 COQ5Q5HYK3 327 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 LRFN4Q6PJG9 635 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 PIWIL3Q7Z3Z3 882 aaKnown RBP8.03□□□□□ -1.12
NUP50-206ENST00000422489 SLC22A24Q8N4F4 322 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 SYT14Q8NB59 555 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 OR2T12Q8NG77 320 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 FGFBP3Q8TAT2 258 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 TMEM255BQ8WV15 326 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 TMEM239Q8WW34 195 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 NEU4Q8WWR8 484 aaPredicted RBP8.03□□□□□ -1.12
NUP50-206ENST00000422489 RCN3Q96D15 328 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 BEX2Q9BXY8 128 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 SLC19A3Q9BZV2 496 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 TPK1Q9H3S4 243 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 ZNF442Q9H7R0 627 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 ZNF446Q9NWS9 450 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 ARMCX1Q9P291 453 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 DUSP13Q9UII6 198 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 FZR1Q9UM11 496 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 MED31Q9Y3C7 131 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 PRR14LQ5THK1 2151 aa8.03□□□□□ -1.12
NUP50-206ENST00000422489 A0A096LNT2 108 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 LOC100289279A0A1B0GTE1 492 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 ELOVL7A1L3X0 281 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 LYNX1G3V0Z9 82 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 NDUFS8O00217 210 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 OR5F1O95221 314 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 FARS2O95363 451 aaKnown RBP8.02□□□□□ -1.13
NUP50-206ENST00000422489 STAMBPO95630 424 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 IGHG1P01857 330 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 ASAH2BP0C7U1 165 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 OR8G3PP0DMU2 310 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 IGHV4-31P0DP07 118 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 LYNX1P0DP58 116 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 CCL2P13500 99 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 ZNF35P13682 527 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 APEHP13798 732 aaKnown RBP8.02□□□□□ -1.13
NUP50-206ENST00000422489 ZNF14P17017 642 aaPredicted RBP8.02□□□□□ -1.13
NUP50-206ENST00000422489 RBM34P42696 430 aaKnown RBP8.02□□□□□ -1.13
NUP50-206ENST00000422489 GZMKP49863 264 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 PPOXP50336 477 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 ZNF84P51523 738 aa8.02□□□□□ -1.13
NUP50-206ENST00000422489 RUNX1T1Q06455 604 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms