RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 EML6Q6ZMW3 1958 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 ANKRD33BA6NCL7 494 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 DVL2O14641 736 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 PHYHO14832 338 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 FZD7O75084 574 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 HLA-DQA2P01906 255 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 IFNGR1P15260 489 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 CALRP27797 417 aaKnown RBP17.03■□□□□ 0.32
USP39-202ENST00000409025 CRABP1P29762 137 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 PSMB10P40306 273 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 FOXK1P85037 733 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 HSF1Q00613 529 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 ZNF181Q2M3W8 571 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 ACSM3Q53FZ2 586 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 H3F3CQ6NXT2 135 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 PAMR1Q6UXH9 720 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 DCDC5Q6ZRR9 648 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 SLC35D2Q76EJ3 337 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 PXKQ7Z7A4 578 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 LAX1Q8IWV1 398 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 HAVCR2Q8TDQ0 301 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 OR5B2Q96R09 309 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 TMEM185BQ9H7F4 350 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 FANCFQ9NPI8 374 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 DAPK2Q9UIK4 370 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 KLHDC2Q9Y2U9 406 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 WDFY4Q6ZS81 3184 aa17.03■□□□□ 0.32
USP39-202ENST00000409025 PSMD9O00233 223 aa17.02■□□□□ 0.32
USP39-202ENST00000409025 SC5DO75845 299 aa17.02■□□□□ 0.32
USP39-202ENST00000409025 SNX4O95219 450 aa17.02■□□□□ 0.32
USP39-202ENST00000409025 KRT8P05787 483 aa17.02■□□□□ 0.32
USP39-202ENST00000409025 LIFP15018 202 aa17.02■□□□□ 0.32
USP39-202ENST00000409025 MYL9P24844 172 aa17.02■□□□□ 0.32
USP39-202ENST00000409025 DPP4P27487 766 aa17.02■□□□□ 0.32
USP39-202ENST00000409025 DSCR4P56555 118 aaPredicted RBP17.02■□□□□ 0.32
USP39-202ENST00000409025 POU3F1Q03052 451 aaPredicted RBP17.02■□□□□ 0.32
USP39-202ENST00000409025 DDI2Q5TDH0 399 aa17.02■□□□□ 0.32
USP39-202ENST00000409025 GTPBP8Q8N3Z3 284 aaPredicted RBP17.02■□□□□ 0.32
USP39-202ENST00000409025 ADPRHL1Q8NDY3 354 aa17.02■□□□□ 0.32
USP39-202ENST00000409025 ABCB9Q9NP78 766 aa17.02■□□□□ 0.32
USP39-202ENST00000409025 ABCB10Q9NRK6 738 aa17.02■□□□□ 0.32
USP39-202ENST00000409025 IGLV1-36A0A0B4J1U3 117 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 A0A1W2PNV4 684 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 SLC35F4A4IF30 521 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 PRR32B1ATL7 298 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 TBX1O43435 398 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 GPANK1O95872 356 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 OPN1LWP04000 364 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 ALOX5APP20292 161 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 CFL1P23528 166 aaKnown RBP17.02■□□□□ 0.31
USP39-202ENST00000409025 OR2B6P58173 313 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 MRPL28Q13084 256 aaKnown RBP17.02■□□□□ 0.31
USP39-202ENST00000409025 ZNF468Q5VIY5 522 aaPredicted RBP17.02■□□□□ 0.31
USP39-202ENST00000409025 DPY19L4Q7Z388 723 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 YIPF7Q8N8F6 280 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 COX4I2Q96KJ9 171 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 JSRP1Q96MG2 331 aaPredicted RBP17.02■□□□□ 0.31
USP39-202ENST00000409025 SACM1LQ9NTJ5 587 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 RPH3AQ9Y2J0 694 aaPredicted RBP17.02■□□□□ 0.31
USP39-202ENST00000409025 HDGFL3Q9Y3E1 203 aa17.02■□□□□ 0.31
USP39-202ENST00000409025 G3V3Y1 287 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 GPRIN2O60269 458 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 NCR1O76036 304 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 TNFSF15O95150 251 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 OR8G3PP0DMU2 310 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 CTLA4P16410 223 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 SHC1P29353 583 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 EGR3Q06889 387 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 TRIM16LQ309B1 348 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 TMEM176BQ3YBM2 270 aaPredicted RBP17.01■□□□□ 0.31
USP39-202ENST00000409025 B3GNTL1Q67FW5 361 aaPredicted RBP17.01■□□□□ 0.31
USP39-202ENST00000409025 TIGD3Q6B0B8 471 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 DNM1P34Q6PK57 102 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 PIP4P1Q86T03 277 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 TPRA1Q86W33 373 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 RAB43Q86YS6 212 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 TEX19Q8NA77 164 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 THEM6Q8WUY1 208 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 TMEM41AQ96HV5 264 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 GNRHR2Q96P88 292 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 MROQ9BYG7 248 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 TSPAN10Q9H1Z9 355 aaPredicted RBP17.01■□□□□ 0.31
USP39-202ENST00000409025 MRM2Q9UI43 246 aaKnown RBP17.01■□□□□ 0.31
USP39-202ENST00000409025 DKKL1Q9UK85 242 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 UGT2A1Q9Y4X1 527 aa17.01■□□□□ 0.31
USP39-202ENST00000409025 A0A1W2PNR3 127 aa17■□□□□ 0.31
USP39-202ENST00000409025 ISPDA4D126 451 aa17■□□□□ 0.31
USP39-202ENST00000409025 CENPBD1B2RD01 187 aa17■□□□□ 0.31
USP39-202ENST00000409025 RAD1O60671 282 aa17■□□□□ 0.31
USP39-202ENST00000409025 P04436 131 aa17■□□□□ 0.31
USP39-202ENST00000409025 OCM2P0CE71 109 aa17■□□□□ 0.31
USP39-202ENST00000409025 OCMP0CE72 109 aaPredicted RBP17■□□□□ 0.31
USP39-202ENST00000409025 SFTPDP35247 375 aa17■□□□□ 0.31
USP39-202ENST00000409025 C19orf57Q0VDD7 668 aa17■□□□□ 0.31
USP39-202ENST00000409025 ACER2Q5QJU3 275 aa17■□□□□ 0.31
USP39-202ENST00000409025 GLRX5Q86SX6 157 aa17■□□□□ 0.31
USP39-202ENST00000409025 OR13C5Q8NGS8 318 aa17■□□□□ 0.31
USP39-202ENST00000409025 OTOSQ8NHW6 89 aa17■□□□□ 0.31
USP39-202ENST00000409025 RPS4Y2Q8TD47 263 aa17■□□□□ 0.31
USP39-202ENST00000409025 ATF6BQ99941 703 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms