RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TSPAN10Q9H1Z9 355 aaPredicted RBP12.21□□□□□ -0.45
VAPB-202ENST00000395802 GP6Q9HCN6 339 aa12.21□□□□□ -0.45
VAPB-202ENST00000395802 HAO2Q9NYQ3 351 aa12.21□□□□□ -0.45
VAPB-202ENST00000395802 VSX1Q9NZR4 365 aaPredicted RBP12.21□□□□□ -0.45
VAPB-202ENST00000395802 SPRR3Q9UBC9 169 aa12.21□□□□□ -0.45
VAPB-202ENST00000395802 ZMIZ1Q9ULJ6 1067 aa12.21□□□□□ -0.45
VAPB-202ENST00000395802 ZNF175Q9Y473 711 aa12.21□□□□□ -0.45
VAPB-202ENST00000395802 FAM183AA6NL82 134 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 AHRRA9YTQ3 701 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 TRAF3IP2O43734 574 aaPredicted RBP12.21□□□□□ -0.46
VAPB-202ENST00000395802 MT-ND2P03891 347 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 DBTP11182 482 aaKnown RBP12.21□□□□□ -0.46
VAPB-202ENST00000395802 PTGER4P35408 488 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 CDKN2AP42771 156 aaKnown RBP12.21□□□□□ -0.46
VAPB-202ENST00000395802 SLC15A1P46059 708 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 BIDP55957 195 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 EMX1Q04741 257 aaPredicted RBP12.21□□□□□ -0.46
VAPB-202ENST00000395802 THEM4Q5T1C6 240 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 GPR141Q7Z602 305 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 SVOPQ8N4V2 548 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 CYB561A3Q8NBI2 242 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 INTS12Q96CB8 462 aaKnown RBP12.21□□□□□ -0.46
VAPB-202ENST00000395802 UCN2Q96RP3 112 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 TEAD3Q99594 435 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 CCDC90BQ9GZT6 254 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 OR51V1Q9H2C8 321 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 RNF122Q9H9V4 155 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 RPRD1BQ9NQG5 326 aaKnown RBP12.21□□□□□ -0.46
VAPB-202ENST00000395802 GLRX2Q9NS18 164 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 MRPS18AQ9NVS2 196 aaKnown RBP12.21□□□□□ -0.46
VAPB-202ENST00000395802 PARPBPQ9NWS1 579 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 RCE1Q9Y256 329 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 FKBP7Q9Y680 259 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 CEPT1Q9Y6K0 416 aa12.21□□□□□ -0.46
VAPB-202ENST00000395802 MED12Q93074 2177 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 IGHV3-15A0A0B4J1V0 119 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 OR6C68A6NDL8 312 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 ERVH48-1M5A8F1 160 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 DCKP27707 260 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 CLRN1P58418 232 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 ZNF91Q05481 1191 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 MELKQ14680 651 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 POMGNT2Q8NAT1 580 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 PROKR2Q8NFJ6 384 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 RNF128Q8TEB7 428 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 FAR1Q8WVX9 515 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 DGCR14Q96DF8 476 aaKnown RBP12.2□□□□□ -0.46
VAPB-202ENST00000395802 TMEM80Q96HE8 168 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 ZNF845Q96IR2 970 aaPredicted RBP12.2□□□□□ -0.46
VAPB-202ENST00000395802 DDOQ99489 341 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 NMNAT2Q9BZQ4 307 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 SYT4Q9H2B2 425 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 CHCHD3Q9NX63 227 aaKnown RBP12.2□□□□□ -0.46
VAPB-202ENST00000395802 MED29Q9NX70 200 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 KLHL13Q9P2N7 655 aa12.2□□□□□ -0.46
VAPB-202ENST00000395802 DNAJC13O75165 2243 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 A0A1B0GTH9 108 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 SLC35F4A4IF30 521 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 OR6C65A6NJZ3 312 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 SLC22A20A6NK97 555 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 ZNF814B7Z6K7 855 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 H3BSA7 217 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 GLCEO94923 617 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 CDK1P06493 297 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 GABRA1P14867 456 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 SPI1P17947 270 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 C21orf33P30042 268 aaPredicted RBP12.19□□□□□ -0.46
VAPB-202ENST00000395802 TTKP33981 857 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 CLDN17P56750 224 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 MVKQ03426 396 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 GLO1Q04760 184 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 ST3GAL4Q11206 333 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 BCDIN3DQ7Z5W3 292 aaKnown RBP12.19□□□□□ -0.46
VAPB-202ENST00000395802 OR13F1Q8NGS4 319 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 ROBO4Q8WZ75 1007 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 MUL1Q969V5 352 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 RNFT2Q96EX2 444 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 ZNF407Q9C0G0 2248 aa12.19□□□□□ -0.46
VAPB-202ENST00000395802 IGKV3D-15A0A087WSY6 115 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 SLC22A23A1A5C7 686 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 ZNF724A8MTY0 619 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 TRMUO75648 421 aaKnown RBP12.18□□□□□ -0.46
VAPB-202ENST00000395802 SEC14L2O76054 403 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 HOXD4P09016 255 aaPredicted RBP12.18□□□□□ -0.46
VAPB-202ENST00000395802 MYL12AP19105 171 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 PTGS2P35354 604 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 GUCA1AP43080 201 aaPredicted RBP12.18□□□□□ -0.46
VAPB-202ENST00000395802 NHLRC1Q6VVB1 395 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 P4HA3Q7Z4N8 544 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 ZBTB46Q86UZ6 589 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 TMEM45BQ96B21 275 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 TXNDC15Q96J42 360 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 KCNK17Q96T54 332 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 ACOT13Q9NPJ3 140 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 ASB6Q9NWX5 421 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 FLVCR1Q9Y5Y0 555 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 FIGNL2A6NMB9 653 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 ZNF716A6NP11 495 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 RAMP1O60894 148 aa12.18□□□□□ -0.46
VAPB-202ENST00000395802 SLC43A1O75387 559 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms