RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 INAQ16352 499 aa13.57□□□□□ -0.24
SCAF11-204ENST00000395454 ZNF766Q5HY98 468 aa13.57□□□□□ -0.24
SCAF11-204ENST00000395454 VASH1Q7L8A9 365 aaPredicted RBP13.57□□□□□ -0.24
SCAF11-204ENST00000395454 ZMYND19Q96E35 227 aaPredicted RBP13.57□□□□□ -0.24
SCAF11-204ENST00000395454 MRGPRX4Q96LA9 322 aa13.57□□□□□ -0.24
SCAF11-204ENST00000395454 GSTK1Q9Y2Q3 226 aa13.57□□□□□ -0.24
SCAF11-204ENST00000395454 HRH3Q9Y5N1 445 aa13.57□□□□□ -0.24
SCAF11-204ENST00000395454 TLN1Q9Y490 2541 aaKnown RBP13.57□□□□□ -0.24
SCAF11-204ENST00000395454 NPIPB13A6NJU9 1138 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 NPIPB4C9JG80 1138 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 AHSA1O95433 338 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 CD1AP06126 327 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 SP1P08047 785 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 MRPL3P09001 348 aaKnown RBP13.56□□□□□ -0.24
SCAF11-204ENST00000395454 RORCP51449 518 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 ZNF45Q02386 682 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 MFSD13AQ14CX5 517 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 C22orf42Q6IC83 251 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 OR5M10Q6IEU7 315 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 SLC25A25Q6KCM7 469 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 LEG1Q6P5S2 330 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 C16orf87Q6PH81 154 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 GALNTL5Q7Z4T8 443 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 JAZF1Q86VZ6 243 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 FADS6Q8N9I5 356 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 SCAIQ8N9R8 606 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 ZNF519Q8TB69 540 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 TMEM203Q969S6 136 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 C1GALT1C1Q96EU7 318 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 JSRP1Q96MG2 331 aaPredicted RBP13.56□□□□□ -0.24
SCAF11-204ENST00000395454 MFRPQ9BY79 579 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 FANCFQ9NPI8 374 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 CRNNQ9UBG3 495 aaPredicted RBP13.56□□□□□ -0.24
SCAF11-204ENST00000395454 GRHPRQ9UBQ7 328 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 TUBD1Q9UJT1 453 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 SIRT4Q9Y6E7 314 aaPredicted RBP13.56□□□□□ -0.24
SCAF11-204ENST00000395454 TRAV17A0A0B4J275 112 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 A0A0G2JMM0 328 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 A0A1W2PPB8 328 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 A0A1W2PRS3 328 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 SLC35F4A4IF30 521 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 KIR3DP1A8MWS1 328 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 RNF13O43567 381 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 GMFGO60234 142 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 SC5DO75845 299 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 SULT1C4O75897 302 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 F13BP05160 661 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 DNASE1L1P49184 302 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 TRAM1Q15629 374 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 PLPPR5Q32ZL2 321 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 DMKNQ6E0U4 476 aaPredicted RBP13.56□□□□□ -0.24
SCAF11-204ENST00000395454 TMEM91Q6ZNR0 172 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 Q6ZNX1 250 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 SSX6Q7RTT6 188 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 CCDC190Q86UF4 302 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 SLC35F2Q8IXU6 374 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 ZFP41Q8N8Y5 198 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 MFSD8Q8NHS3 518 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 RPS4Y2Q8TD47 263 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 C4orf36Q96KX1 117 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 WDFY2Q96P53 400 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 TBX5Q99593 518 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 ALG12Q9BV10 488 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 POTEKPQ9BYX7 375 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 C6orf62Q9GZU0 229 aaPredicted RBP13.56□□□□□ -0.24
SCAF11-204ENST00000395454 NUAK2Q9H093 628 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 MARCH7Q9H992 704 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 DEPPQ9NTK1 212 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 PPP4R1LQ9P1A2 415 aa13.56□□□□□ -0.24
SCAF11-204ENST00000395454 KLF13Q9Y2Y9 288 aaPredicted RBP13.56□□□□□ -0.24
SCAF11-204ENST00000395454 ATRXP46100 2492 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 ANKRD33BA6NCL7 494 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 GABRPO00591 440 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 PLPP3O14495 311 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 LRRTM2O43300 516 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 GRPRP30550 384 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 ZP4Q12836 540 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 INPP5JQ15735 1006 aaPredicted RBP13.55□□□□□ -0.24
SCAF11-204ENST00000395454 ZNF684Q5T5D7 378 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 EEF1A1P5Q5VTE0 462 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 RBMXL3Q8N7X1 1067 aaKnown RBP13.55□□□□□ -0.24
SCAF11-204ENST00000395454 TMEM178AQ8NBL3 297 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 OR2T4Q8NH00 348 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 CHPT1Q8WUD6 406 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 PGLYRP3Q96LB9 341 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 DCLRE1CQ96SD1 692 aaKnown RBP13.55□□□□□ -0.24
SCAF11-204ENST00000395454 ANGPTL4Q9BY76 406 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 PROK2Q9HC23 129 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 SMURF1Q9HCE7 757 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 INIPQ9NRY2 104 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 MED11Q9P086 117 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 ST6GALNAC2Q9UJ37 374 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 KALRNO60229 2985 aa13.55□□□□□ -0.24
SCAF11-204ENST00000395454 PNMA8CA0A1B0GUJ8 204 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 ERVH48-1M5A8F1 160 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 OGG1O15527 345 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 NME2P1O60361 137 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 CDRT1O95170 752 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 SNX4O95219 450 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 CNR1P21554 472 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms