RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SQSTM1Q13501 440 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 ZNF542PQ5EBM4 170 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 OPN5Q6U736 354 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 ZNF765Q7L2R6 523 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 CALHM3Q86XJ0 350 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 TMEM255BQ8WV15 326 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 LRFN5Q96NI6 719 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 CYSLTR2Q9NS75 346 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 CHST2Q9Y4C5 530 aa18.17■□□□□ 0.5
SHANK1-203ENST00000391813 JTBO76095 146 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 WDR88Q6ZMY6 472 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 BAP18Q8IXM2 172 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 SYS1Q8N2H4 156 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 RHBDD1Q8TEB9 315 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 ST6GAL2Q96JF0 529 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 GPR55Q9Y2T6 319 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-203ENST00000391813 HHLA1C9JL84 531 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 CNOT4O95628 575 aaKnown RBP18.16■□□□□ 0.5
SHANK1-203ENST00000391813 TIMP2P16035 220 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 HTRA4P83105 476 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-203ENST00000391813 DLX2Q07687 328 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-203ENST00000391813 HYAL4Q2M3T9 481 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 CD300LGQ6UXG3 332 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 NAA40Q86UY6 237 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 NANPQ8TBE9 248 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 DVL3Q92997 716 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-203ENST00000391813 HINT3Q9NQE9 182 aaKnown RBP18.16■□□□□ 0.5
SHANK1-203ENST00000391813 UBQLN4Q9NRR5 601 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 ALKBH4Q9NXW9 302 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 ZNF44P15621 663 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 MRPL49Q13405 166 aaKnown RBP18.16■□□□□ 0.5
SHANK1-203ENST00000391813 OR52R1Q8NGF1 315 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 FTSJ1Q9UET6 329 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 CBY1Q9Y3M2 126 aa18.16■□□□□ 0.5
SHANK1-203ENST00000391813 PCMT1P22061 227 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 MMP15P51511 669 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 AKR1C1Q04828 323 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 ZNF74Q16587 644 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 ZNF620Q6ZNG0 422 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 SLC22A24Q8N4F4 322 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 MARVELD1Q9BSK0 173 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 SELENOIQ9C0D9 397 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 IL5P05113 134 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 SERPINA7P05543 415 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 CHRM2P08172 466 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 VASPP50552 380 aaPredicted RBP18.15■□□□□ 0.5
SHANK1-203ENST00000391813 IHHQ14623 411 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 TCTN3Q6NUS6 607 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 SENP5Q96HI0 755 aaPredicted RBP18.15■□□□□ 0.5
SHANK1-203ENST00000391813 NMNAT3Q96T66 252 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 EIF4EP06730 217 aaKnown RBP18.15■□□□□ 0.5
SHANK1-203ENST00000391813 RAC2P15153 192 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 OR4D6Q8NGJ1 314 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 NPRL2Q8WTW4 380 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 OR1F2PQ96R84 312 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 ATF6BQ99941 703 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 DEFB126Q9BYW3 111 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 NUMA1Q14980 2115 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 SSC5DA1L4H1 1573 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 AQP8O94778 261 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 MT-ND4LP03901 98 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 FBLP22087 321 aaKnown RBP18.15■□□□□ 0.5
SHANK1-203ENST00000391813 PSMB6P28072 239 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 CD80P33681 288 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 MRPL58Q14197 206 aaKnown RBP18.15■□□□□ 0.5
SHANK1-203ENST00000391813 NKG7Q16617 165 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 KIAA0895LQ68EN5 471 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 DPY19L4Q7Z388 723 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 ASB16Q96NS5 453 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 PBX4Q9BYU1 374 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 EPHX3Q9H6B9 360 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 CMC2Q9NRP2 79 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 CBLCQ9ULV8 474 aa18.15■□□□□ 0.5
SHANK1-203ENST00000391813 YKT6O15498 198 aa18.14■□□□□ 0.5
SHANK1-203ENST00000391813 B4GALT3O60512 393 aa18.14■□□□□ 0.5
SHANK1-203ENST00000391813 GLCEO94923 617 aa18.14■□□□□ 0.5
SHANK1-203ENST00000391813 SOD1P00441 154 aa18.14■□□□□ 0.5
SHANK1-203ENST00000391813 CD14P08571 375 aa18.14■□□□□ 0.5
SHANK1-203ENST00000391813 ZNF28P17035 718 aa18.14■□□□□ 0.5
SHANK1-203ENST00000391813 EPHA1P21709 976 aa18.14■□□□□ 0.5
SHANK1-203ENST00000391813 CNN3Q15417 329 aaKnown RBP18.14■□□□□ 0.5
SHANK1-203ENST00000391813 NAXDQ8IW45 347 aa18.14■□□□□ 0.5
SHANK1-203ENST00000391813 RELL2Q8NC24 303 aaPredicted RBP18.14■□□□□ 0.5
SHANK1-203ENST00000391813 OR13C9Q8NGT0 318 aa18.14■□□□□ 0.5
SHANK1-203ENST00000391813 TMED6Q8WW62 240 aa18.14■□□□□ 0.5
SHANK1-203ENST00000391813 PDCD1LG2Q9BQ51 273 aa18.14■□□□□ 0.5
SHANK1-203ENST00000391813 DOCK2Q92608 1830 aa18.14■□□□□ 0.5
SHANK1-203ENST00000391813 TECPR1Q7Z6L1 1165 aa18.14■□□□□ 0.49
SHANK1-203ENST00000391813 C1orf87Q8N0U7 546 aa18.14■□□□□ 0.49
SHANK1-203ENST00000391813 ZNF286AQ9HBT8 521 aa18.14■□□□□ 0.49
SHANK1-203ENST00000391813 LAMB2P55268 1798 aa18.14■□□□□ 0.49
SHANK1-203ENST00000391813 A0A1B0GWA3 101 aa18.14■□□□□ 0.49
SHANK1-203ENST00000391813 TSPAN12O95859 305 aa18.14■□□□□ 0.49
SHANK1-203ENST00000391813 USP53Q70EK8 1073 aa18.14■□□□□ 0.49
SHANK1-203ENST00000391813 RBM45Q8IUH3 476 aaKnown RBP18.14■□□□□ 0.49
SHANK1-203ENST00000391813 TMEM151BQ8IW70 566 aa18.14■□□□□ 0.49
SHANK1-203ENST00000391813 OR52E1Q8NGJ3 308 aa18.14■□□□□ 0.49
SHANK1-203ENST00000391813 OR5K2Q8NHB8 316 aa18.14■□□□□ 0.49
SHANK1-203ENST00000391813 PCYT1BQ9Y5K3 369 aaPredicted RBP18.14■□□□□ 0.49
SHANK1-203ENST00000391813 ZNF593O00488 134 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms