RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 OR2L13Q8N349 312 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 CPSF7Q8N684 471 aaKnown RBP3.9□□□□□ -1.79
PMS1-202ENST00000374826 TMEM178AQ8NBL3 297 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 ZNF485Q8NCK3 441 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 OR10G3Q8NGC4 313 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 OR4A15Q8NGL6 344 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 GRHL3Q8TE85 626 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 PIK3R3Q92569 461 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 TMBIM1Q969X1 311 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 TESCQ96BS2 214 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 EFHD2Q96C19 240 aaPredicted RBP3.9□□□□□ -1.79
PMS1-202ENST00000374826 INTS12Q96CB8 462 aaKnown RBP3.9□□□□□ -1.79
PMS1-202ENST00000374826 SNRNP40Q96DI7 357 aaKnown RBP3.9□□□□□ -1.79
PMS1-202ENST00000374826 SPACA9Q96E40 222 aaPredicted RBP3.9□□□□□ -1.79
PMS1-202ENST00000374826 OMA1Q96E52 524 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 FAM120BQ96EK7 910 aaKnown RBP3.9□□□□□ -1.79
PMS1-202ENST00000374826 CHMP6Q96FZ7 201 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 C16orf58Q96GQ5 468 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 JSRP1Q96MG2 331 aaPredicted RBP3.9□□□□□ -1.79
PMS1-202ENST00000374826 VSTM2LQ96N03 204 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 MS4A4EQ96PG1 132 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 BTBD9Q96Q07 612 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 TAAR6Q96RI8 345 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 ZBTB18Q99592 522 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 INPP5KQ9BT40 448 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 BARHL1Q9BZE3 327 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 FAM107BQ9H098 131 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 CLMPQ9H6B4 373 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 SCPEP1Q9HB40 452 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 C3orf14Q9HBI5 128 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 DEPPQ9NTK1 212 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 ZCCHC3Q9NUD5 404 aaKnown RBP3.9□□□□□ -1.79
PMS1-202ENST00000374826 ASF1BQ9NVP2 202 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 TAS2R9Q9NYW1 312 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 FLRT3Q9NZU0 649 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 PRODH2Q9UF12 536 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 CFL2Q9Y281 166 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 KLF13Q9Y2Y9 288 aaPredicted RBP3.9□□□□□ -1.79
PMS1-202ENST00000374826 OR10H1Q9Y4A9 318 aa3.9□□□□□ -1.79
PMS1-202ENST00000374826 CHD3Q12873 2000 aaKnown RBP3.9□□□□□ -1.79
PMS1-202ENST00000374826 UBR5O95071 2799 aaPredicted RBP3.9□□□□□ -1.79
PMS1-202ENST00000374826 USP9YO00507 2555 aaPredicted RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 CADP27708 2225 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 NPIPA5A0A0B4J1W7 369 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 C17orf51A8MQB3 221 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 NPIPA7E9PJI5 369 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 NPIPA5E9PKD4 350 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 TFECO14948 347 aaPredicted RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 ACOX3O15254 700 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 EMC8O43402 210 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 SCO2O43819 266 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 ICOSLGO75144 302 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 UGT2B11O75310 529 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 REM1O75628 298 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 BCAS2O75934 225 aaPredicted RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 WISP2O76076 250 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 TGDSO95455 350 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 P04436 131 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 HMGN2P05204 90 aaKnown RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 NPIPA8P0DM63 369 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 CT45A8P0DMV1 189 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 CT45A9P0DMV2 189 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 TROVE2P10155 538 aaKnown RBP eCLIP3.89□□□□□ -1.79
PMS1-202ENST00000374826 CD1EP15812 388 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 ZNF24P17028 368 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 NCF2P19878 526 aaPredicted RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 IL12BP29460 328 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 GABRA3P34903 492 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 KRT20P35900 424 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 CDKN2CP42773 168 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 PPICP45877 212 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 ZFP36L2P47974 494 aaKnown RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 UQCRFS1P47985 274 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 CCT3P49368 545 aaKnown RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 TMED10P49755 219 aaKnown RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 POLR2JP52435 117 aaKnown RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 GNGT1P63211 74 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 KCNJ2P63252 427 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 PLGLB1Q02325 96 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 SQLEQ14534 574 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 LASP1Q14847 261 aaKnown RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 ZNHIT3Q15649 155 aaPredicted RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 INAQ16352 499 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 NTRK2Q16620 822 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 DUSP5Q16690 384 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 ZNF791Q3KP31 576 aaPredicted RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 ZNF876PQ49A33 203 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 GTDC1Q4AE62 458 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 AGKQ53H12 422 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 CT45A2Q5DJT8 189 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 CCNJQ5T5M9 372 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 SLC22A10Q63ZE4 541 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 SLC25A25Q6KCM7 469 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 MFSD12Q6NUT3 480 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 TNFAIP8L2Q6P589 184 aaPredicted RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 ANGPTL8Q6UXH0 198 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 MYPOPQ86VE0 399 aaPredicted RBP3.89□□□□□ -1.79
PMS1-202ENST00000374826 GPALPP1Q8IXQ4 340 aa3.89□□□□□ -1.79
PMS1-202ENST00000374826 FBXW8Q8N3Y1 598 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms