RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 LAMP5Q9UJQ1 280 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 ATP6V1DQ9Y5K8 247 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 UNC13CQ8NB66 2214 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 CELSR1Q9NYQ6 3014 aa4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 MN1Q10571 1320 aaPredicted RBP4.45□□□□□ -1.7
RNU4-39P-201ENST00000362455 A0A1B0GTH9 108 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 A0A1B0GWJ7 208 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 GOLGA6L4A6NEF3 574 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 KRTAP16-1A8MUX0 517 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 DFFAO00273 331 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 SDHDO14521 159 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 SPAG6O75602 509 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 FGFR1OPO95684 399 aaKnown RBP4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 NUDT14O95848 222 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 CAPN1P07384 714 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 THRBP10828 461 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 FOLR1P15328 257 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 HNRNPH3P31942 346 aaKnown RBP4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 CYLC1P35663 651 aaPredicted RBP4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 GPR1P46091 355 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 STC1P52823 247 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 TPI1P60174 286 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 AP1S1P61966 158 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 MS4A2Q01362 244 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 EIF2B1Q14232 305 aaKnown RBP4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 VWA2Q5GFL6 755 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 LRRC66Q68CR7 880 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 SLC25A24Q6NUK1 477 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 NIPAL3Q6P499 406 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 LRRC8BQ6P9F7 803 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 REG3GQ6UW15 175 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 WASH2PQ6VEQ5 465 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 HACD2Q6Y1H2 254 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 GPRIN3Q6ZVF9 776 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 PRSS48Q7RTY5 328 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 ZNF677Q86XU0 584 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 LRRC49Q8IUZ0 686 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 MCOLN2Q8IZK6 566 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 FADS6Q8N9I5 356 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 BEST4Q8NFU0 473 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 PDCD6IPQ8WUM4 868 aaKnown RBP4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 ADIPOR1Q96A54 375 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 TGM7Q96PF1 710 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 CNPY3Q9BT09 278 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 TBCDQ9BTW9 1192 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 SNRNP25Q9BV90 132 aaKnown RBP4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 DHX35Q9H5Z1 703 aaKnown RBP4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 WDR76Q9H967 626 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 LHX9Q9NQ69 397 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 C1orf123Q9NWV4 160 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 PCSK1NQ9UHG2 260 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 TMCC3Q9ULS5 477 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 NTNG1Q9Y2I2 539 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 DHRS7Q9Y394 339 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 C2CD3Q4AC94 2353 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 SCN8AQ9UQD0 1980 aa4.44□□□□□ -1.7
RNU4-39P-201ENST00000362455 NYNRINQ9P2P1 1898 aaKnown RBP4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 CCDC168Q8NDH2 2452 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 IGKV3D-15A0A087WSY6 115 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 IGHV5-51A0A0C4DH38 117 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 MFSD2BA6NFX1 497 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 ARGFXA6NJG6 315 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 LRRC30A6NM36 301 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 SHISA9B4DS77 424 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 PSMD11O00231 422 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 ZW10O43264 779 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 MT-ND1P03886 318 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 NELFEP18615 380 aaKnown RBP4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 XRCC1P18887 633 aaPredicted RBP4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 MIPP30301 263 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 CA5AP35218 305 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 HCAR3P49019 387 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 POU3F4P49335 361 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 AIF1P55008 147 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 ZNF33BQ06732 778 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 CYLC2Q14093 348 aaPredicted RBP4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 C17orf58Q2M2W7 97 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 ZNF311Q5JNZ3 666 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 ZNF506Q5JVG8 444 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 HENMT1Q5T8I9 393 aaKnown RBP4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 ZNF841Q6ZN19 808 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 TMUB2Q71RG4 321 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 GRAMD2AQ8IUY3 354 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 ZNF547Q8IVP9 402 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 ARL6IP6Q8N6S5 226 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 ZNF540Q8NDQ6 660 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 NRTNQ99748 197 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 TPPP3Q9BW30 176 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 NUDT9Q9BW91 350 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 ING2Q9H160 280 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 UCK1Q9HA47 277 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 LPAR2Q9HBW0 351 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 SLC40A1Q9NP59 571 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 ASF1BQ9NVP2 202 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 RDH8Q9NYR8 311 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 B9D1Q9UPM9 204 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 PRSS21Q9Y6M0 314 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 F8P00451 2351 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 POLEQ07864 2286 aa4.43□□□□□ -1.7
RNU4-39P-201ENST00000362455 HIVEP3Q5T1R4 2406 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms