RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 OR9A4Q8NGU2 314 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 CHTF18Q8WVB6 975 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 MRPS24Q96EL2 167 aaKnown RBP14.81□□□□□ -0.04
NPHP3-201ENST00000337331 BMFQ96LC9 184 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 PARP12Q9H0J9 701 aaKnown RBP14.81□□□□□ -0.04
NPHP3-201ENST00000337331 VDAC3Q9Y277 283 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 HIF3AQ9Y2N7 669 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 ACOD1A6NK06 481 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 IMPA2O14732 288 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 SYT7O43581 403 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 IL33O95760 270 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 NFYBP25208 207 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 GJA4P35212 333 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 PLP2Q04941 152 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 TMEM184AQ6ZMB5 413 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 HAVCR2Q8TDQ0 301 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 FOXRED1Q96CU9 486 aaPredicted RBP14.8□□□□□ -0.04
NPHP3-201ENST00000337331 RREB1Q92766 1687 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 DOCK2Q92608 1830 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 PRSS38A1L453 326 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 SEC14L5O43304 696 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 MPIG6BO95866 241 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 SERPINA5P05154 406 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 ANKRD34CP0C6C1 535 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 AKAIN1P0CW23 69 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 F3P13726 295 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF765Q7L2R6 523 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 HOXB13Q92826 284 aaPredicted RBP14.8□□□□□ -0.04
NPHP3-201ENST00000337331 SLC7A11Q9UPY5 501 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 NOSIPQ9Y314 301 aaKnown RBP14.8□□□□□ -0.04
NPHP3-201ENST00000337331 ABLIM3O94929 683 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 APEHP13798 732 aaKnown RBP14.8□□□□□ -0.04
NPHP3-201ENST00000337331 ZFP36L2P47974 494 aaKnown RBP14.8□□□□□ -0.04
NPHP3-201ENST00000337331 PXNP49023 591 aaPredicted RBP14.8□□□□□ -0.04
NPHP3-201ENST00000337331 VEGFBP49765 207 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 ERV3-1Q14264 604 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 PRAMEF8Q5VWM4 474 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 PRAMEF7Q5VXH5 474 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 POM121Q96HA1 1249 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 INTS14Q96SY0 518 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 C1QTNF3Q9BXJ4 246 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 CRLF2Q9HC73 371 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 FTSJ1Q9UET6 329 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 WASF3Q9UPY6 502 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 NDUFA2O43678 99 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 C1QCP02747 245 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 CAMLGP49069 296 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 AWAT2Q6E213 333 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 SHISA6Q6ZSJ9 500 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 TMEM150AQ86TG1 271 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 SKA3Q8IX90 412 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 WBP2Q969T9 261 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 TM4SF18Q96CE8 201 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF75AQ96N20 296 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 RBM14Q96PK6 669 aaKnown RBP14.8□□□□□ -0.04
NPHP3-201ENST00000337331 TMEM38AQ9H6F2 299 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 SIDT1Q9NXL6 827 aaKnown RBP14.8□□□□□ -0.04
NPHP3-201ENST00000337331 ASIC5Q9NY37 505 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 TAS2R5Q9NYW4 299 aa14.8□□□□□ -0.04
NPHP3-201ENST00000337331 ATAD5Q96QE3 1844 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 A0A087X0M5 115 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 A0A1B0GX30 115 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 OR5H14A6NHG9 310 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 H0YGG7 62 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 ABCD4O14678 606 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF43P17038 809 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 CD53P19397 219 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 SLC2A5P22732 501 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 ARF3P61204 181 aaPredicted RBP14.79□□□□□ -0.04
NPHP3-201ENST00000337331 IL13RA1P78552 427 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 OR51S1Q8NGJ8 323 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 MYEOVQ96EZ4 313 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 FAM71F1Q96KD3 344 aaPredicted RBP14.79□□□□□ -0.04
NPHP3-201ENST00000337331 FOXN4Q96NZ1 517 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 TMEM82A0PJX8 343 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 SLC34A2O95436 690 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 SFTPDP35247 375 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 GLO1Q04760 184 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 PABPC1L2AQ5JQF8 200 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 YOD1Q5VVQ6 348 aaPredicted RBP14.79□□□□□ -0.04
NPHP3-201ENST00000337331 FAM71E1Q6IPT2 247 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 GLDNQ6ZMI3 551 aaPredicted RBP14.79□□□□□ -0.04
NPHP3-201ENST00000337331 GLB1L2Q8IW92 636 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 OR13C5Q8NGS8 318 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 NPRL2Q8WTW4 380 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 ISOC2Q96AB3 205 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 PQLC2LA1A4F0 135 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 SLC16A7O60669 478 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 TMEM225BP0DP42 221 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 ABCD3P28288 659 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 SERPINF1P36955 418 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 CCINQ13939 588 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 UBE2NLQ5JXB2 153 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 HIST2H3AQ71DI3 136 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 CD163Q86VB7 1156 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 MS4A3Q96HJ5 214 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 TOX2Q96NM4 488 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 AMDHD1Q96NU7 426 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 PDFQ9HBH1 243 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 GPATCH2Q9NW75 528 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms