RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 STEAP1Q9UHE8 339 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 XIRP2A4UGR9 3374 aa7.9□□□□□ -1.14
CLK1-201ENST00000321356 RANBP2P49792 3224 aaKnown RBP7.9□□□□□ -1.15
CLK1-201ENST00000321356 ARPC4-TTLL3A0A0A6YYG9 625 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 A0A1B0GTH9 108 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 hCG_1807616A0A1W2PRN6 198 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 ANXA2P2A6NMY6 339 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 L7N2F9 121 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 CLDN4O14493 209 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 LINC01565O15544 149 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 SRPX2O60687 465 aaPredicted RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 B3GALNT1O75752 331 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 CDC123O75794 336 aaPredicted RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 AKR7A3O95154 331 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 NSA2O95478 260 aaKnown RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 HIST1H2ABP04908 130 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 ANXA2P07355 339 aaKnown RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 ACSM4P0C7M7 580 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 UBL4AP11441 157 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 MAOAP21397 527 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 CALCRP30988 508 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 CSF2RBP32927 897 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 GALNSP34059 522 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 FAUP35544 74 aaKnown RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 KIR3DL2P43630 455 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 RABIFP47224 123 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 MAT1AQ00266 395 aaKnown RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 RPL18Q07020 188 aaKnown RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 EIF2B5Q13144 721 aaKnown RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 RBMS2Q15434 407 aaKnown RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 B3GNTL1Q67FW5 361 aaPredicted RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 FDX2Q6P4F2 183 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 CBLN3Q6UW01 205 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 NHLRC1Q6VVB1 395 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 MAMSTRQ6ZN01 415 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 HIST3H2AQ7L7L0 130 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 ZNF227Q86WZ6 799 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 SIX5Q8N196 739 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 SDR16C5Q8N3Y7 309 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 PRSS35Q8N3Z0 413 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 OR4C16Q8NGL9 310 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 OR10AC1Q8NH08 325 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 THRSPQ92748 146 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 HIST1H2ACQ93077 130 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 PNPLA2Q96AD5 504 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 ZNF524Q96C55 264 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 OMA1Q96E52 524 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 WDR89Q96FK6 387 aaPredicted RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 MSANTD3Q96H12 275 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 C4orf45Q96LM5 186 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 KLHL15Q96M94 604 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 ZNF285Q96NJ3 590 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 GAS2L1Q99501 681 aaPredicted RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 UBQLN4Q9NRR5 601 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 TAS2R8Q9NYW2 309 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 GRHPRQ9UBQ7 328 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 OPN4Q9UHM6 478 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 LAMP5Q9UJQ1 280 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 YBX2Q9Y2T7 364 aaKnown RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 TMEM14AQ9Y6G1 99 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 OR2W5A6NFC9 320 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 MFSD2BA6NFX1 497 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 GGT3PA6NGU5 568 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 TVP23AA6NH52 213 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 TTLL8A6PVC2 850 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 H0YC42 278 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 SUSD5O60279 629 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 CTAG2O75638 210 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 RBBP9O75884 186 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 RGS11O94810 467 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 IL33O95760 270 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 F13BP05160 661 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 CSF1P09603 554 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 S100A11P31949 105 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 HSD17B7P56937 341 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 SEC61A1P61619 476 aaKnown RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 HHEXQ03014 270 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 RASGEF1BQ0VAM2 473 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 ERV3-1Q14264 604 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 HLXQ14774 488 aaPredicted RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 PCGF3Q3KNV8 242 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 ARMC6Q6NXE6 501 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 TMEM92Q6UXU6 159 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 MED25Q71SY5 747 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 CHMP1BQ7LBR1 199 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 DPY19L4Q7Z388 723 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 BIVMQ86UB2 503 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 C10orf53Q8N6V4 93 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 ZNF676Q8N7Q3 588 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 GATSQ8NAP1 163 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 OR51A4Q8NGJ6 313 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 OR6N1Q8NGY5 312 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 OR6N2Q8NGY6 317 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 TMEM106AQ96A25 262 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 KTI12Q96EK9 354 aaPredicted RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 OR1F2PQ96R84 312 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 COMMD4Q9H0A8 199 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 C12orf10Q9HB07 376 aa7.89□□□□□ -1.15
CLK1-201ENST00000321356 SRA1Q9HD15 236 aaKnown RBP7.89□□□□□ -1.15
CLK1-201ENST00000321356 GPR27Q9NS67 375 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms