RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 CD207Q9UJ71 328 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 IER3IP1Q9Y5U9 82 aa11.2□□□□□ -0.62
PCF11-201ENST00000298281 SLC5A10A0PJK1 596 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 SLC9B1P1A6NJY1 282 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 SUMO1P63165 101 aaKnown RBP11.19□□□□□ -0.62
PCF11-201ENST00000298281 RTP2Q5QGT7 225 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 NPSR1Q6W5P4 371 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 MRAP2Q96G30 205 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 SLC41A2Q96JW4 573 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 OR6C1Q96RD1 312 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 SELENOIQ9C0D9 397 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 DCAF13Q9NV06 445 aaKnown RBP11.19□□□□□ -0.62
PCF11-201ENST00000298281 USP3Q9Y6I4 520 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 OR7C2O60412 319 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 RPS16P62249 146 aaKnown RBP11.19□□□□□ -0.62
PCF11-201ENST00000298281 CDK5Q00535 292 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 CDK5R2Q13319 367 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 CNIH2Q6PI25 160 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 NDUFAF7Q7L592 441 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 ZNF384Q8TF68 577 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 ZNF296Q8WUU4 475 aaPredicted RBP11.19□□□□□ -0.62
PCF11-201ENST00000298281 THSD1Q9NS62 852 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 PPP1R3CQ9UQK1 317 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 AUP1Q9Y679 476 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 V9GY05 133 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 AHCTF1Q8WYP5 2266 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 MON2Q7Z3U7 1717 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 K7ERQ8 282 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 LDB3O75112 727 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 RPS26P11Q5JNZ5 115 aaPredicted RBP11.19□□□□□ -0.62
PCF11-201ENST00000298281 GPRIN1Q7Z2K8 1008 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 ADOQ96SZ5 270 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 TIMM29Q9BSF4 260 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 RASD1Q9Y272 281 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 PTGDR2Q9Y5Y4 395 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 TMEM235A6NFC5 223 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 GPR37O15354 613 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 BLVRBP30043 206 aaPredicted RBP11.19□□□□□ -0.62
PCF11-201ENST00000298281 DCTP40126 519 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 CLDN17P56750 224 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 TAS2R19P59542 299 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 SOX4Q06945 474 aaPredicted RBP11.19□□□□□ -0.62
PCF11-201ENST00000298281 PODNL1Q6PEZ8 512 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 CYB561A3Q8NBI2 242 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 AMBRA1Q9C0C7 1298 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 TMEM181Q9P2C4 612 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 DLG5Q8TDM6 1919 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 SULT1C4O75897 302 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 LYZL6O75951 148 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 NUDT3O95989 172 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 TIMP1P01033 207 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 IDUAP35475 653 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 CXCL12P48061 93 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 TMEM184AQ6ZMB5 413 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 OR10J5Q8NHC4 309 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 HES4Q9HCC6 221 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 TP53BP1Q12888 1972 aaPredicted RBP11.19□□□□□ -0.62
PCF11-201ENST00000298281 DOCK7Q96N67 2140 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 IFT172Q9UG01 1749 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 ZNF815PA8K554 130 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 CYR61O00622 381 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 NME4O00746 187 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 ERV3-1Q14264 604 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 TCTN1Q2MV58 587 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 PRAMEF20Q5VT98 475 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 PPP1R3BQ86XI6 285 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 CDC20BQ86Y33 519 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 SEMA6DQ8NFY4 1073 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 RPL3LQ92901 407 aaKnown RBP11.19□□□□□ -0.62
PCF11-201ENST00000298281 ZPBPQ9BS86 351 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 RSRP1Q9BUV0 290 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 NARFLQ9H6Q4 476 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 TCFL5Q9UL49 500 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 ZNF835Q9Y2P0 537 aa11.19□□□□□ -0.62
PCF11-201ENST00000298281 ANKUB1A6NFN9 424 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 CHD2O14647 1828 aaKnown RBP11.18□□□□□ -0.62
PCF11-201ENST00000298281 DOK2O60496 412 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 RDH16O75452 317 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 RFPL3O75679 317 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 AHRP35869 848 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 CD300LGQ6UXG3 332 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 TMEM178AQ8NBL3 297 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 CD200R1Q8TD46 325 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 LURAP1Q96LR2 239 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 P2RY12Q9H244 342 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 GORASP2Q9H8Y8 452 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 RNF186Q9NXI6 227 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 IGKV6-21A0A0C4DH24 114 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 PLRG1O43660 514 aaKnown RBP11.18□□□□□ -0.62
PCF11-201ENST00000298281 GPRIN2O60269 458 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 GPLD1P80108 840 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 LTB4RQ15722 352 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 NETO1Q8TDF5 533 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 C1QTNF6Q9BXI9 259 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 CRISPLD2Q9H0B8 497 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 CDCP1Q9H5V8 836 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 C5orf52A6NGY3 159 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 ACKR3P25106 362 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 MNX1P50219 401 aaPredicted RBP11.18□□□□□ -0.62
PCF11-201ENST00000298281 GPR85P60893 370 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms