RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PFDN5Q99471 154 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 RPS10P5Q9NQ39 176 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 ST6GAL1P15907 406 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 TMEM11P17152 192 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 CHATP28329 748 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 APOBEC1P41238 236 aaKnown RBP15.9■□□□□ 0.14
SHANK1-201ENST00000293441 S100A7AQ86SG5 101 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 TEX37Q96LM6 180 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 TUBB1Q9H4B7 451 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 TMEM38AQ9H6F2 299 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 HSD17B6O14756 317 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 CMPK2Q5EBM0 449 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 SHEQ5VZ18 495 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 LIPHQ8WWY8 451 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 ANKRD9Q96BM1 317 aaPredicted RBP15.9■□□□□ 0.14
SHANK1-201ENST00000293441 SUCNR1Q9BXA5 334 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 FAM117AQ9C073 453 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 PLCXD1Q9NUJ7 323 aa15.9■□□□□ 0.14
SHANK1-201ENST00000293441 TRIM23P36406 574 aa15.89■□□□□ 0.14
SHANK1-201ENST00000293441 CAMK2BQ13554 666 aa15.89■□□□□ 0.14
SHANK1-201ENST00000293441 RUNX2Q13950 521 aa15.89■□□□□ 0.14
SHANK1-201ENST00000293441 RDH10Q8IZV5 341 aa15.89■□□□□ 0.14
SHANK1-201ENST00000293441 UBL7Q96S82 380 aaPredicted RBP15.89■□□□□ 0.14
SHANK1-201ENST00000293441 NIPAL2Q9H841 368 aa15.89■□□□□ 0.14
SHANK1-201ENST00000293441 NT5DC2Q9H857 520 aa15.89■□□□□ 0.14
SHANK1-201ENST00000293441 TBX21Q9UL17 535 aa15.89■□□□□ 0.14
SHANK1-201ENST00000293441 SLC2A1P11166 492 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 SNCAP37840 140 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 SLC19A1P41440 591 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 GRB2P62993 217 aaKnown RBP15.89■□□□□ 0.13
SHANK1-201ENST00000293441 CST9LP1Q5W188 147 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 NCCRP1Q6ZVX7 275 aaPredicted RBP15.89■□□□□ 0.13
SHANK1-201ENST00000293441 SLC22A24Q8N4F4 322 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 DAZAP1Q96EP5 407 aaKnown RBP15.89■□□□□ 0.13
SHANK1-201ENST00000293441 ATP23Q9Y6H3 246 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 MSTNO14793 375 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 EFSO43281 561 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 CSO75390 466 aaKnown RBP15.89■□□□□ 0.13
SHANK1-201ENST00000293441 ZNF93P35789 620 aaPredicted RBP15.89■□□□□ 0.13
SHANK1-201ENST00000293441 ILKQ13418 452 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 HNF4GQ14541 408 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 RBMXL3Q8N7X1 1067 aaKnown RBP15.89■□□□□ 0.13
SHANK1-201ENST00000293441 CHST8Q9H2A9 424 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 A0A1W2PR48 441 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 MT-ATP6P00846 226 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 PMP2P02689 132 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 CCR2P41597 374 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 MAVSQ7Z434 540 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 MAML2Q8IZL2 1156 aaPredicted RBP15.89■□□□□ 0.13
SHANK1-201ENST00000293441 SLC38A1Q9H2H9 487 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 EIF4E2O60573 245 aaKnown RBP15.89■□□□□ 0.13
SHANK1-201ENST00000293441 RPA2P15927 270 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 OMGP23515 440 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 AGFG1P52594 562 aaKnown RBP15.89■□□□□ 0.13
SHANK1-201ENST00000293441 FOXC1Q12948 553 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 Q499Y3 187 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 KCNG3Q8TAE7 436 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 STT3BQ8TCJ2 826 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 SLC35A4Q96G79 324 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 CEPT1Q9Y6K0 416 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 A0A1W2PPH5 198 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 TGM4P49221 684 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 BTG2P78543 158 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 MFGE8Q08431 387 aaPredicted RBP15.89■□□□□ 0.13
SHANK1-201ENST00000293441 MRPL58Q14197 206 aaKnown RBP15.89■□□□□ 0.13
SHANK1-201ENST00000293441 SEMA4CQ9C0C4 833 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 MKRN2Q9H000 416 aaKnown RBP15.89■□□□□ 0.13
SHANK1-201ENST00000293441 HRH3Q9Y5N1 445 aa15.89■□□□□ 0.13
SHANK1-201ENST00000293441 DDX60LQ5H9U9 1706 aaKnown RBP15.88■□□□□ 0.13
SHANK1-201ENST00000293441 ZIC2O95409 532 aaPredicted RBP15.88■□□□□ 0.13
SHANK1-201ENST00000293441 EVI2BP34910 448 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 AKR1C1Q04828 323 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 FXNQ16595 210 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 PLK5Q496M5 336 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 GDPD3Q7L5L3 318 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 ENTHD1Q8IYW4 607 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 BAHD1Q8TBE0 780 aaPredicted RBP15.88■□□□□ 0.13
SHANK1-201ENST00000293441 Q96M85 177 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 MENTQ9BUN1 341 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 KCNJ16Q9NPI9 418 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 LAMB1P07942 1786 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 HS3ST1O14792 307 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 S100A7P31151 101 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 SCGB2A2Q13296 93 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 SLC10A1Q14973 349 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 IDO2Q6ZQW0 420 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 SUMF2Q8NBJ7 301 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 TMEM185AQ8NFB2 350 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 NDUFB7P17568 137 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 FPR3P25089 353 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 KIR2DL3P43628 341 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 BRICD5Q6PL45 260 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 SNX11Q9Y5W9 270 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 A0A1W2PS29 197 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 OR8G1Q15617 311 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 HACD4Q5VWC8 232 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 RBM45Q8IUH3 476 aaKnown RBP15.88■□□□□ 0.13
SHANK1-201ENST00000293441 PLPP7Q8NBV4 271 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 NUDT8Q8WV74 236 aa15.88■□□□□ 0.13
SHANK1-201ENST00000293441 RBMXL1Q96E39 390 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms