RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 BEND4Q6ZU67 534 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 CADM3Q8N126 398 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 LRRC18Q8N456 261 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 STT3BQ8TCJ2 826 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 C2orf72A6NCS6 295 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 M0R082 166 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 OR52A1Q9UKL2 312 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 PADI1Q9ULC6 663 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 A6NL46 340 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 HOXB9P17482 250 aaPredicted RBP15.32■□□□□ 0.04
PHRF1-201ENST00000264555 GABREP78334 506 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 FOXK1P85037 733 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 FABP5Q01469 135 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 AAED1Q7RTV5 226 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 TRAPPC6BQ86SZ2 158 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 GPR32P1Q8NGA4 272 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 OR56B1Q8NGI3 324 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 GABRG3Q99928 467 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 ZNF175Q9Y473 711 aa15.32■□□□□ 0.04
PHRF1-201ENST00000264555 TRIM64CA6NLI5 447 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 LMO7DNF2Z398 122 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 SERPINA2P20848 420 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 GTPBP8Q8N3Z3 284 aaPredicted RBP15.31■□□□□ 0.04
PHRF1-201ENST00000264555 SPEM1Q8N4L4 309 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 FAM3DQ96BQ1 224 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 COA3Q9Y2R0 106 aaPredicted RBP15.31■□□□□ 0.04
PHRF1-201ENST00000264555 SCN4AP35499 1836 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 TRBV5-3A0A0A0MS03 114 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 TRABD2BA6NFA1 517 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 ANKRD30BLA7E2S9 258 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 P2RY10O00398 339 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 NUDT21O43809 227 aaKnown RBP15.31■□□□□ 0.04
PHRF1-201ENST00000264555 ICOSLGO75144 302 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 EPHA4P54764 986 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 FXYD4P59646 89 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 SLC16A14Q7RTX9 510 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 DCXRQ7Z4W1 244 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 SLC22A24Q8N4F4 322 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 NKAIN3Q8N8D7 197 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 OR6M1Q8NGM8 313 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 DCUN1D4Q92564 292 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 MED18Q9BUE0 208 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 FOXQ1Q9C009 403 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 NXF5Q9H1B4 397 aaKnown RBP15.31■□□□□ 0.04
PHRF1-201ENST00000264555 hCG_1807616A0A1W2PRN6 198 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 DVL2O14641 736 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 IFNA5P01569 189 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 ELK1P19419 428 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 DLSTP36957 453 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 PCBP3P57721 371 aaKnown RBP15.31■□□□□ 0.04
PHRF1-201ENST00000264555 HTR4Q13639 388 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 LRRC69Q6ZNQ3 347 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 GPR155Q7Z3F1 870 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 ENY2Q9NPA8 101 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 ACAD8Q9UKU7 415 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 PCDHGA3Q9Y5H0 932 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 LOC100289279A0A1B0GTE1 492 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 FRG2CA6NGY1 282 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 RAF1P04049 648 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 FASLGP48023 281 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 HCCSP53701 268 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 Q6ZS52 159 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 ARIH2OSQ8N7S6 290 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 KCNG3Q8TAE7 436 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 PLA2G12AQ9BZM1 189 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 DNTTIP1Q9H147 329 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 IL20Q9NYY1 176 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 PARP14Q460N5 1801 aa15.31■□□□□ 0.04
PHRF1-201ENST00000264555 GAAP10253 952 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 IFNGR1P15260 489 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 TGFBR3Q03167 851 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 SLC7A5P1Q8MH63 180 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 OR51D1Q8NGF3 324 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 ATOH1Q92858 354 aaPredicted RBP15.3■□□□□ 0.04
PHRF1-201ENST00000264555 RSPRY1Q96DX4 576 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 ARSGQ96EG1 525 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 ZNF764Q96H86 408 aaPredicted RBP15.3■□□□□ 0.04
PHRF1-201ENST00000264555 TMEM184BQ9Y519 407 aaPredicted RBP15.3■□□□□ 0.04
PHRF1-201ENST00000264555 CTSVO60911 334 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 SPDEFO95238 335 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 GPR176Q14439 515 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 ACTBL2Q562R1 376 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 PLCXD3Q63HM9 321 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 ZNF709Q8N972 641 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 OR2A5Q96R48 311 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 TSNAXQ99598 290 aaKnown RBP15.3■□□□□ 0.04
PHRF1-201ENST00000264555 SLCO5A1Q9H2Y9 848 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 TCEAL2Q9H3H9 227 aaPredicted RBP15.3■□□□□ 0.04
PHRF1-201ENST00000264555 METTL17Q9H7H0 456 aaPredicted RBP15.3■□□□□ 0.04
PHRF1-201ENST00000264555 ZNF346Q9UL40 294 aaKnown RBP15.3■□□□□ 0.04
PHRF1-201ENST00000264555 CHST2Q9Y4C5 530 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 MOSPD3O75425 235 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 SULT1C4O75897 302 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 HOXD12P35452 270 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 VEGFCP49767 419 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 PNLIPRP2P54317 469 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 KNL1Q8NG31 2342 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 SNX18Q96RF0 628 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 METTL9Q9H1A3 318 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 TMEM82A0PJX8 343 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms