RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ZC3H12DA2A288 527 aaKnown RBP11.84□□□□□ -0.51
SLIRP-201ENST00000238688 FAM183AA6NL82 134 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 RNF13O43567 381 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 ATE1O95260 518 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 CELA2AP08217 269 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 HSMCR30P0CW71 290 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 CNR1P21554 472 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 GABRA5P31644 462 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 ETV1P50549 477 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 RAC1P63000 192 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 ERVK-25P63136 954 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 MRPL49Q13405 166 aaKnown RBP11.84□□□□□ -0.51
SLIRP-201ENST00000238688 CCDC58Q4VC31 144 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 EEF1A1P5Q5VTE0 462 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 LEG1Q6P5S2 330 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 PAQR6Q6TCH4 344 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 ZNF322Q6U7Q0 402 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-201ENST00000238688 BCDIN3DQ7Z5W3 292 aaKnown RBP11.84□□□□□ -0.51
SLIRP-201ENST00000238688 ZBTB46Q86UZ6 589 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 SDR9C7Q8NEX9 313 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 BBS1Q8NFJ9 593 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 OR51G2Q8NGK0 314 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 ZNF417Q8TAU3 575 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 ZNF519Q8TB69 540 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 POC1BQ8TC44 478 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 OTULINQ96BN8 352 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 ZNF524Q96C55 264 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 ZHX1-C8orf76Q96EF9 292 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 Q96M85 177 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 OR5M11Q96RB7 305 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 ZNF587Q96SQ5 575 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-201ENST00000238688 FAM173AQ9BQD7 235 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 ZNF649Q9BS31 505 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 ALG12Q9BV10 488 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 OR51V1Q9H2C8 321 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 MARCH7Q9H992 704 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 PROK2Q9HC23 129 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 KLHL1Q9NR64 748 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 ASF1BQ9NVP2 202 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 QPCTLQ9NXS2 382 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 STMN3Q9NZ72 180 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 CCDC59Q9P031 241 aaKnown RBP11.84□□□□□ -0.51
SLIRP-201ENST00000238688 DKKL1Q9UK85 242 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 RASD1Q9Y272 281 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 B3GNT3Q9Y2A9 372 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 PRSS37A4D1T9 235 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 OR6C68A6NDL8 312 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 C12orf71A8MTZ7 269 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 LRRN3E7EW58 273 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 CLPXO76031 633 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 HLA-DPB1P04440 258 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 TFPIP10646 304 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 ITGA3P26006 1051 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 FGF9P31371 208 aaPredicted RBP11.83□□□□□ -0.52
SLIRP-201ENST00000238688 SLC16A1P53985 500 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 ROR2Q01974 943 aaKnown RBP11.83□□□□□ -0.52
SLIRP-201ENST00000238688 POU4F3Q15319 338 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 TSTQ16762 297 aaKnown RBP11.83□□□□□ -0.52
SLIRP-201ENST00000238688 BICRALQ6AI39 1079 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 OR5M10Q6IEU7 315 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 CD200R1LQ6Q8B3 271 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 SLC16A9Q7RTY1 509 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 PHC2Q8IXK0 858 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 BEST3Q8N1M1 668 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 CISD2Q8N5K1 135 aaKnown RBP11.83□□□□□ -0.52
SLIRP-201ENST00000238688 SIRT6Q8N6T7 355 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 OR4F15Q8NGB8 312 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 SMPDL3BQ92485 455 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 SLC25A36Q96CQ1 311 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 ADAD1Q96M93 576 aaKnown RBP11.83□□□□□ -0.52
SLIRP-201ENST00000238688 TSPAN32Q96QS1 320 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 NMNAT3Q96T66 252 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 ALG8Q9BVK2 526 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 OR2B2Q9GZK3 357 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 KCNN2Q9H2S1 579 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 ZFP64Q9NPA5 681 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 BABAM2Q9NXR7 383 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 CLEC2DQ9UHP7 191 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 FBXL2Q9UKC9 423 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 SSR3Q9UNL2 185 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 GSTK1Q9Y2Q3 226 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 KLF13Q9Y2Y9 288 aaPredicted RBP11.83□□□□□ -0.52
SLIRP-201ENST00000238688 MYO7BQ6PIF6 2116 aa11.83□□□□□ -0.52
SLIRP-201ENST00000238688 A0A1W2PPW3 197 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 NPIPA5E9PKD4 350 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 GADD45AP24522 165 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 PCSK6P29122 969 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 SOX6P35712 828 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 MYBPHQ13203 477 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 ACKR1Q16570 336 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 EIF2S3LQ2VIR3 472 aaKnown RBP11.82□□□□□ -0.52
SLIRP-201ENST00000238688 MESTQ5EB52 335 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 PRAMEF20Q5VT98 475 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 POMZP3Q6PJE2 187 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 PLEKHG7Q6ZR37 379 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 TMPPEQ6ZT21 453 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 MS4A15Q8N5U1 240 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 ZNF454Q8N9F8 522 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 CYB561A3Q8NBI2 242 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 OR10H4Q8NGA5 316 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms