RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	YEATS4	O95619	227 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	SEMA4F	O95754	770 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	CTSL	P07711	333 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	IGFBP1	P08833	259 aa	Predicted RBP	4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	H2BFM	P0C1H6	154 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	PNMA6A	P0CW24	399 aa	Predicted RBP	4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	HSMCR30	P0CW71	290 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	TPSB2	P20231	275 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	CSK	P41240	450 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	MAGEA5	P43359	124 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	PSMD8	P48556	350 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	MFAP2	P55001	183 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	DAOA	P59103	153 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	TPM4	P67936	248 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	TPSAB1	Q15661	275 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	C2CD6	Q53TS8	623 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	C9orf64	Q5T6V5	341 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	KCTD16	Q68DU8	428 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	REP15	Q6BDI9	236 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	FAM71F2	Q6NXP2	309 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	CTAGE6	Q86UF2	777 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	UNC93A	Q86WB7	457 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	CCDC71	Q8IV32	467 aa	Predicted RBP	4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	ZNF440	Q8IYI8	595 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	SLC25A45	Q8N413	288 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	ZNRF1	Q8ND25	227 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	STXBP6	Q8NFX7	210 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	OR10A7	Q8NGE5	316 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	IL1F10	Q8WWZ1	152 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	TAF15	Q92804	592 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	SH3YL1	Q96HL8	342 aa	Predicted RBP	4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	TGM7	Q96PF1	710 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	RBM4B	Q9BQ04	359 aa	Known RBP	4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	LIME1	Q9H400	295 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	UFSP2	Q9NUQ7	469 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	ANAPC7	Q9UJX3	599 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	GGA2	Q9UJY4	613 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	LSM7	Q9UK45	103 aa	Known RBP	4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	TRAF3IP3	Q9Y228	551 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	MMP24	Q9Y5R2	645 aa		4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	FLNB	O75369	2602 aa	Known RBP	4.57	□□□□□ -1.68
NRXN1-223	ENST00000625891	DOCK4	Q8N1I0	1966 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	SCN8A	Q9UQD0	1980 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	LRP4	O75096	1905 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	IGLV4-3	A0A075B6K6	122 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891		A0A0J9YWU9	116 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	PVALEF	A0A1B0GWK0	134 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	METTL21EP	A6NDL7	271 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	ZSCAN5B	A6NJL1	495 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	FAM74A7	A6NL05	159 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	RAD51B	O15315	384 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	IDH3B	O43837	385 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	JCHAIN	P01591	159 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	IGF1	P05019	195 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	IVL	P07476	585 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	H2AFZ	P0C0S5	128 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	NCF2	P19878	526 aa	Predicted RBP	4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	CST6	Q15828	149 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	ZIC1	Q15915	447 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	SSX2	Q16385	188 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	KCTD21	Q4G0X4	260 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	FAM74A3	Q4VXF1	159 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	HES3	Q5TGS1	186 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	DOK6	Q6PKX4	331 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	TAC4	Q86UU9	113 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	IFNE	Q86WN2	208 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	VSTM4	Q8IW00	320 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	C10orf67	Q8IYJ2	551 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891		Q8NBF4	154 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	AEN	Q8WTP8	325 aa	Known RBP	4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	NPRL2	Q8WTW4	380 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	PIGC	Q92535	297 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	NT5C3B	Q969T7	300 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	DNAJA3	Q96EY1	480 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	TMA16	Q96EY4	203 aa	Known RBP	4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	C11orf24	Q96F05	449 aa	Predicted RBP	4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	SLC45A3	Q96JT2	553 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	ATF6B	Q99941	703 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	VGLL1	Q99990	258 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	CCDC77	Q9BR77	488 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	NUP58	Q9BVL2	599 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	TCEAL2	Q9H3H9	227 aa	Predicted RBP	4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	RHOJ	Q9H4E5	214 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	FBXO44	Q9H4M3	255 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	RAB20	Q9NX57	234 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	FBXL12	Q9NXK8	326 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	SENP1	Q9P0U3	644 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	STOML2	Q9UJZ1	356 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	PTBP2	Q9UKA9	531 aa	Known RBP	4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	ERVW-1	Q9UQF0	538 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	PIEZO2	Q9H5I5	2752 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	ZFC3H1	O60293	1989 aa	Known RBP	4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	MYO18B	Q8IUG5	2567 aa		4.56	□□□□□ -1.68
NRXN1-223	ENST00000625891	OR7A17	O14581	309 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	SNAP91	O60641	907 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	CIB2	O75838	187 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	TPM1	P09493	284 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	SFTPC	P11686	197 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	CCNC	P24863	283 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms