RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 C8orf44Q96CB5 159 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 AGAP4Q96P64 663 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 CTRCQ99895 268 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 TXNIPQ9H3M7 391 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 WDR76Q9H967 626 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 GALNT9Q9HCQ5 603 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 NPAP1Q9NZP6 1156 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 MRM2Q9UI43 246 aaKnown RBP17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 C2orf72A6NCS6 295 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 PLPP3O14495 311 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 FLRT2O43155 660 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 UPK3AO75631 287 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 ZFAND5O76080 213 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 AKR7A3O95154 331 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 CER1O95813 267 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 ABHD16AO95870 558 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 OR8G3PP0DMU2 310 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 CASP3P42574 277 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 DLX5P56178 289 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 MRPL28Q13084 256 aaKnown RBP17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 YIF1BQ5BJH7 314 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 CEP78Q5JTW2 689 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 RAB43Q86YS6 212 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 UBQLNLQ8IYU4 475 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 TRMT10AQ8TBZ6 339 aaKnown RBP17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 KLHL15Q96M94 604 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 MRPL39Q9NYK5 338 aaKnown RBP17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 LAMP5Q9UJQ1 280 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 FKBP7Q9Y680 259 aa17.8■□□□□ 0.44
PCDHB11-202ENST00000624887 CPAMD8Q8IZJ3 1885 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 PRSS37A4D1T9 235 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 ZNF879B4DU55 563 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 D6RAR5 112 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 FTCDNL1E5RQL4 147 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 NTN3O00634 580 aaPredicted RBP17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 ZFPL1O95159 310 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 OR6A2O95222 327 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 PAHP00439 452 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 PLGP00747 810 aaPredicted RBP17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 IGHMP01871 453 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 EIF4EP06730 217 aaKnown RBP17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 EPXP11678 715 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 ALOX5APP20292 161 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 TALDO1P37837 337 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 DUSP3P51452 185 aaPredicted RBP17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 HSD17B12Q53GQ0 312 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 LIPNQ5VXI9 398 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 OR6N2Q8NGY6 317 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 ZNF417Q8TAU3 575 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 ZNF587Q96SQ5 575 aaPredicted RBP17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 INTS14Q96SY0 518 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 KCNJ15Q99712 375 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 AKIRIN1Q9H9L7 192 aaPredicted RBP17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 MYOTQ9UBF9 498 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 TMEM14AQ9Y6G1 99 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 A0A0G2JMP0 313 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 A0A0X1KG70 313 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 KRT8P05787 483 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 RBMS1P29558 406 aaKnown RBP17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 APOBEC1P41238 236 aaKnown RBP17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 YIPF7Q8N8F6 280 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 OR4M2Q8NGB6 313 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 OR4M1Q8NGD0 313 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 NPAS1Q99742 590 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 WDR54Q9H977 334 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 VSX1Q9NZR4 365 aaPredicted RBP17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 MED11Q9P086 117 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 ABRACLQ9P1F3 81 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 B9D1Q9UPM9 204 aa17.79■□□□□ 0.44
PCDHB11-202ENST00000624887 ATF1P18846 271 aa17.78■□□□□ 0.44
PCDHB11-202ENST00000624887 S100A1P23297 94 aa17.78■□□□□ 0.44
PCDHB11-202ENST00000624887 EGR3Q06889 387 aa17.78■□□□□ 0.44
PCDHB11-202ENST00000624887 TRA2AQ13595 282 aaKnown RBP eCLIP17.78■□□□□ 0.44
PCDHB11-202ENST00000624887 LYPD8Q6UX82 237 aa17.78■□□□□ 0.44
PCDHB11-202ENST00000624887 DPY19L4Q7Z388 723 aa17.78■□□□□ 0.44
PCDHB11-202ENST00000624887 SYT9Q86SS6 491 aa17.78■□□□□ 0.44
PCDHB11-202ENST00000624887 RDH10Q8IZV5 341 aa17.78■□□□□ 0.44
PCDHB11-202ENST00000624887 BMPERQ8N8U9 685 aa17.78■□□□□ 0.44
PCDHB11-202ENST00000624887 MAP6Q96JE9 813 aa17.78■□□□□ 0.44
PCDHB11-202ENST00000624887 NOX4Q9NPH5 578 aa17.78■□□□□ 0.44
PCDHB11-202ENST00000624887 PHYHO14832 338 aa17.77■□□□□ 0.44
PCDHB11-202ENST00000624887 PIN1P1O15428 100 aa17.77■□□□□ 0.44
PCDHB11-202ENST00000624887 RPP14O95059 124 aaKnown RBP17.77■□□□□ 0.44
PCDHB11-202ENST00000624887 SRMP19623 302 aa17.77■□□□□ 0.44
PCDHB11-202ENST00000624887 ALKBH1Q13686 389 aaKnown RBP17.77■□□□□ 0.44
PCDHB11-202ENST00000624887 KCNJ8Q15842 424 aa17.77■□□□□ 0.44
PCDHB11-202ENST00000624887 NDUFA5Q16718 116 aa17.77■□□□□ 0.44
PCDHB11-202ENST00000624887 ZNF528Q3MIS6 628 aa17.77■□□□□ 0.44
PCDHB11-202ENST00000624887 TRIM61Q5EBN2 209 aa17.77■□□□□ 0.44
PCDHB11-202ENST00000624887 HSD17B8Q92506 261 aa17.77■□□□□ 0.44
PCDHB11-202ENST00000624887 RGP1Q92546 391 aaPredicted RBP17.77■□□□□ 0.44
PCDHB11-202ENST00000624887 MMP28Q9H239 520 aa17.77■□□□□ 0.44
PCDHB11-202ENST00000624887 NXT1Q9UKK6 140 aaKnown RBP17.77■□□□□ 0.44
PCDHB11-202ENST00000624887 ALPK2Q86TB3 2170 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 ANKRD61A6NGH8 418 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 ETV2O00321 342 aaPredicted RBP17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 GDF9O60383 454 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 GPANK1O95872 356 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms