RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 RANBP3LQ86VV4 465 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 OR6N1Q8NGY5 312 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 RDH5Q92781 318 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 ZNF837Q96EG3 531 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 OR52B2Q96RD2 323 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 SNX18Q96RF0 628 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 IGKV1D-42A0A075B6H8 117 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 FMO6PO60774 539 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 RAB36O95755 333 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 HLA-HP01893 362 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 TFP02787 698 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 ANPEPP15144 967 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 ZNF14P17017 642 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 HTR2AP28223 471 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 RAB1AP62820 205 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 OR1Q1Q15612 314 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 GKAP1Q5VSY0 366 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 SLC2A7Q6PXP3 512 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 BLOC1S3Q6QNY0 202 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 NHLRC1Q6VVB1 395 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 GLCCI1Q86VQ1 547 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 CDK20Q8IZL9 346 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 ZCCHC24Q8N2G6 241 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 OR9I1Q8NGQ6 314 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 FOXB1Q99853 325 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 ULBP2Q9BZM5 246 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 ZNF385DQ9H6B1 395 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 SEC14L4Q9UDX3 406 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 SLC7A8Q9UHI5 535 aa15.35■□□□□ 0.05
SHKBP1-227ENST00000602011 A0A0B4J2E0 115 aa15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 A0A1B0GX12 115 aa15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 OR6A2O95222 327 aa15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 BGLAPP02818 100 aa15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 HOXB9P17482 250 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 GPX2P18283 190 aa15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 GPR6P46095 362 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 RGS8P57771 180 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 ZNF613Q6PF04 617 aa15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 MYPOPQ86VE0 399 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 NFKBIDQ8NI38 313 aa15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 RNF217Q8TC41 542 aa15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 ZNF75AQ96N20 296 aa15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 ZNF416Q9BWM5 594 aa15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 MRPL37Q9BZE1 423 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 C1orf198Q9H425 327 aa15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 GRIP1Q9Y3R0 1128 aa15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 USH1CQ9Y6N9 552 aa15.34■□□□□ 0.05
SHKBP1-227ENST00000602011 ZNF503-AS2A6NEH8 195 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 PLPP3O14495 311 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 POLR3GO15318 223 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 PTHP01270 115 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 SERPINA5P05154 406 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 IGFBP1P08833 259 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 AHCYP23526 432 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 CAMK2DQ13557 499 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 FXNQ16595 210 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 MOGQ16653 247 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 PHYHD1Q5SRE7 291 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 CARD17Q5XLA6 110 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 MAVSQ7Z434 540 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 C10orf53Q8N6V4 93 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 HIPK4Q8NE63 616 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 OR5J2Q8NH18 312 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 OR6X1Q8NH79 312 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 SPDL1Q96EA4 605 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 CCDC28BQ9BUN5 200 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 EMC6Q9BV81 110 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 TCF7L2Q9NQB0 619 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 SLC25A37Q9NYZ2 338 aa15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 V9GYY5 206 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-227ENST00000602011 FARS2O95363 451 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 HPRP00739 348 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 OR8G3PP0DMU2 310 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 HLA-DOBP13765 273 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 IL2RGP31785 369 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 PTDSS1P48651 473 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 CSNK1A1P48729 337 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 MAGOHP61326 146 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 PIGFQ07326 219 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 RBBP4Q09028 425 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 ZP4Q12836 540 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 SCARB2Q14108 478 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 NRN1LQ496H8 165 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 ELFN2Q5R3F8 820 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 MEX3DQ86XN8 651 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 ARMC8Q8IUR7 673 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 TMEM186Q96B77 213 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 TXNDC15Q96J42 360 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 C7orf26Q96N11 449 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 RACGAP1Q9H0H5 632 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 RABEP2Q9H5N1 569 aa15.32■□□□□ 0.04
SHKBP1-227ENST00000602011 WIPF1O43516 503 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 TPST1O60507 370 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 CBLP22681 906 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 GIPRP48546 466 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 TEKQ02763 1124 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 PCGF3Q3KNV8 242 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 LINC00114Q6XXX2 140 aa15.31■□□□□ 0.04
SHKBP1-227ENST00000602011 OR1J2Q8NGS2 313 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms