RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SLC22A10Q63ZE4 541 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 ATRAIDQ6UW56 229 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 SHISA6Q6ZSJ9 500 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 UBALD2Q8IYN6 164 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 PRR22Q8IZ63 422 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 ZFP41Q8N8Y5 198 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 OR51G2Q8NGK0 314 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 SLC41A2Q96JW4 573 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 OR1F2PQ96R84 312 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 TNFRSF13CQ96RJ3 184 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 DDOQ99489 341 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 TMED9Q9BVK6 235 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 HCAR1Q9BXC0 346 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 TP53BP1Q12888 1972 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 CPED1A4D0V7 1026 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 CDC14CA4D256 554 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 LINC01387J3KSC0 135 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 ITGA10O75578 1167 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 EIF4EP06730 217 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 GUSBP08236 651 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 HPGDP15428 266 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 HTR1FP30939 366 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 MEOX2P50222 304 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 PSMD4P55036 377 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 ULK3Q6PHR2 472 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 TMPRSS9Q7Z410 1059 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 DEFB123Q8N688 67 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 SLC2A12Q8TD20 617 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 MVB12AQ96EY5 273 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 ELMOD3Q96FG2 381 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 NRSN2Q9GZP1 204 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 FBXL2Q9UKC9 423 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 MMACHCQ9Y4U1 282 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 RGS11O94810 467 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 NFYAP23511 347 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 GALNSP34059 522 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 SLC1A3P43003 542 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 SRP9P49458 86 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 CCR4P51679 360 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 SLC16A1P53985 500 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 FOXK2Q01167 660 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 ZNF600Q6ZNG1 722 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 SIAH3Q8IW03 269 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 PDZD9Q8IXQ8 264 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 LNX2Q8N448 690 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 SPICQ8N5J4 248 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 COQ8AQ8NI60 647 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 ABHD1Q96SE0 405 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 ZNF426Q9BUY5 554 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 IGKV3D-11A0A0A0MRZ8 115 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 LRRN3E7EW58 273 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 PEX14O75381 377 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 PPP1R3DO95685 299 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 APOC3P02656 99 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 ALDOBP05062 364 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 GIPP09681 153 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 RORAP35398 523 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 CD226Q15762 336 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 TMEM44Q2T9K0 475 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 ZNF791Q3KP31 576 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 WDR74Q6RFH5 385 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 CARFQ8N187 725 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 SIRT6Q8N6T7 355 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 FAM71CQ8NEG0 241 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 MRPS24Q96EL2 167 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 LRRN3Q9H3W5 708 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 EVA1AQ9H8M9 152 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 MKL2Q9ULH7 1088 aa15.54■□□□□ 0.08
SHKBP1-205ENST00000594973 TCRBV16S1A1N1A0A5B0 115 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 FAM86C2PA6NEL3 165 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 MCRIP1C9JLW8 97 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 TFP02787 698 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 NOS3P29474 1203 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 MMP15P51511 669 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 BIKQ13323 160 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 DYRK1AQ13627 763 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 KLHL26Q53HC5 615 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 GUSBP11Q6P575 273 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 CDH26Q8IXH8 852 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 ZNF454Q8N9F8 522 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 ZNF527Q8NB42 609 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 CYB561A3Q8NBI2 242 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 BEST4Q8NFU0 473 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 ZNF501Q96CX3 271 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 ADOQ96SZ5 270 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 SEC22CQ9BRL7 303 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 OR51V1Q9H2C8 321 aa15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 NPDC1Q9NQX5 325 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-205ENST00000594973 A0A1B0GW55 424 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 A0A1B0GX78 115 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 GMFGO60234 142 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 RP2O75695 350 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 DDAH2O95865 285 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 DUX4L2P0CJ85 424 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 DUX4L3P0CJ86 424 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 DUX4L4P0CJ87 422 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 DUX4L5P0CJ88 424 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 DUX4L6P0CJ89 424 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 DUX4L7P0CJ90 424 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms