RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 TUBA1BP68363 451 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 TUBA4AP68366 448 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 IL1RL1Q01638 556 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 CAMK2DQ13557 499 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 FHL1Q13642 323 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 IQCCQ4KMZ1 466 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 CARD17Q5XLA6 110 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 SLC22A25Q6T423 547 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 TUBA1AQ71U36 451 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 SLC35D2Q76EJ3 337 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 YTHDF3Q7Z739 585 aaKnown RBP10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 MYPOPQ86VE0 399 aaPredicted RBP10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 CIARTQ8N365 385 aaPredicted RBP10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 GPR137CQ8N3F9 429 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 ANKS4BQ8N8V4 417 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 TMEM54Q969K7 222 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 HS6ST2Q96MM7 605 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 SLC38A2Q96QD8 506 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 DHRS9Q9BPW9 319 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 NSRP1Q9H0G5 558 aaKnown RBP10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 GSX1Q9H4S2 264 aaPredicted RBP10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 CXorf56Q9H5V9 222 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 SEC61A2Q9H9S3 476 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 ARL8BQ9NVJ2 186 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 B3GNT2Q9NY97 397 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 ZNF224Q9NZL3 707 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 ARL2BPQ9Y2Y0 163 aa10.79□□□□□ -0.68
SMARCD2-209ENST00000581832 NDUFAB1O14561 156 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 DYNC1I1O14576 645 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 PIP5K1CO60331 668 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 SERPINA1P01009 418 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 PAX7P23759 505 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 CDKN1AP38936 164 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 YAP1P46937 504 aaKnown RBP10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 BIDP55957 195 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 RUNX1T1Q06455 604 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 RPL18Q07020 188 aaKnown RBP10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 ST3GAL3Q11203 375 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 HIST3H3Q16695 136 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 LRFN4Q6PJG9 635 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 OFCC1Q8IZS5 231 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 RBM15BQ8NDT2 890 aaKnown RBP10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 GEMIN6Q8WXD5 167 aaKnown RBP10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 LZICQ8WZA0 190 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 SGTBQ96EQ0 304 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 HSH2DQ96JZ2 352 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 ADAD1Q96M93 576 aaKnown RBP10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 Q96MF0 132 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 SEPHS2Q99611 448 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 KCTD14Q9BQ13 255 aaPredicted RBP10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 MRPL13Q9BYD1 178 aaKnown RBP10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 SPAG4Q9NPE6 437 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 FAM53CQ9NYF3 392 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 RHCGQ9UBD6 479 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 CD300AQ9UGN4 299 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 CR1P17927 2039 aa10.78□□□□□ -0.68
SMARCD2-209ENST00000581832 SONP18583 2426 aaKnown RBP10.77□□□□□ -0.68
SMARCD2-209ENST00000581832 ATP6V1G2-DDX39BF2Z307 99 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 BLOC1S5-TXNDC5H3BN57 136 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 RNF13O43567 381 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 NDUFS7O75251 213 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 SERPINI2O75830 405 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 SEC14L2O76054 403 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 F13BP05160 661 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 CELA3BP08861 270 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 CECR9P0C854 216 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 PGA4P0DJD7 388 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 PGA3P0DJD8 388 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 CBR1P16152 277 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 MAKP20794 623 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 CALCRP30988 508 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 ATP5J2P56134 94 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 UBE2NP61088 152 aaKnown RBP10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 MELKQ14680 651 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 LAPTM4AQ15012 233 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 MST1LQ2TV78 715 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 IFI44LQ53G44 452 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 GLYATQ6IB77 296 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 KLHL24Q6TFL4 600 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 DNM1P46Q6ZS02 220 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 LRRC75AQ8NAA5 344 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 MOSPD2Q8NHP6 518 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 SLC25A44Q96H78 314 aaPredicted RBP10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 C18orf12Q96KH6 178 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 COX4I2Q96KJ9 171 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 C7orf34Q96L11 122 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 SMR3AQ99954 134 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 GORASP2Q9H8Y8 452 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 NOX3Q9HBY0 568 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 DCAF13Q9NV06 445 aaKnown RBP10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 GLTPQ9NZD2 209 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 EGFL7Q9UHF1 273 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 MOKQ9UQ07 419 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 HIF3AQ9Y2N7 669 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 MED31Q9Y3C7 131 aa10.77□□□□□ -0.69
SMARCD2-209ENST00000581832 A0A087WUU8 490 aa10.76□□□□□ -0.69
SMARCD2-209ENST00000581832 HTR3EA5X5Y0 456 aa10.76□□□□□ -0.69
SMARCD2-209ENST00000581832 TRIM64A6NGJ6 449 aa10.76□□□□□ -0.69
SMARCD2-209ENST00000581832 TRIM64BA6NI03 449 aa10.76□□□□□ -0.69
SMARCD2-209ENST00000581832 ZNF726A6NNF4 738 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms