RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 ATG2BQ96BY7 2078 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 MYO16Q9Y6X6 1858 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 C7orf66A4D0T2 115 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 MEGF11A6BM72 1044 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 TXNL1O43396 289 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 FGF17O60258 216 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 GLCEO94923 617 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 HTR3BO95264 441 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 CCL5P13501 91 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 ADH6P28332 368 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 KCNAB1Q14722 419 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 KIR2DS3Q14952 304 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 DPY19L2P2Q6ZN68 376 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 TTLL10Q6ZVT0 673 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 MAMDC2Q7Z304 686 aaPredicted RBP9.66□□□□□ -0.86
USB1-212ENST00000566082 KIAA0907Q7Z7F0 614 aaPredicted RBP9.66□□□□□ -0.86
USB1-212ENST00000566082 MRPL43Q8N983 215 aaKnown RBP9.66□□□□□ -0.86
USB1-212ENST00000566082 SMIM3Q9BZL3 60 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 FBXO34Q9NWN3 711 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 SIP14410 1827 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 GGT3PA6NGU5 568 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 CDK2AP1O14519 115 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 PHYHO14832 338 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 CD14P08571 375 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 HNRNPA1P09651 372 aaKnown RBP eCLIP9.66□□□□□ -0.86
USB1-212ENST00000566082 PET100P0DJ07 73 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 UBE2IP63279 158 aaKnown RBP9.66□□□□□ -0.86
USB1-212ENST00000566082 NKAPLQ5M9Q1 402 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 SLC25A30Q5SVS4 291 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 C3orf33Q6P1S2 294 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 SLC39A5Q6ZMH5 540 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 STAC2Q6ZMT1 411 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 MAMSTRQ6ZN01 415 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 ZNF440Q8IYI8 595 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 MARC2Q969Z3 335 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 OR1F2PQ96R84 312 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 APMAPQ9HDC9 416 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 DUSP22Q9NRW4 184 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 HHLA2Q9UM44 414 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 PDCD11Q14690 1871 aaKnown RBP9.66□□□□□ -0.86
USB1-212ENST00000566082 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 TMEM212A6NML5 194 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 SNRPGP15A8MWD9 76 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 MCRIP1C9JLW8 97 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 OLFM2O95897 454 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 IGHA1P01876 353 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 HOXB5P09067 269 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 PNMTP11086 282 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 GALP22466 123 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 HTR2CP28335 458 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 RAG2P55895 527 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 MAT1AQ00266 395 aaKnown RBP9.65□□□□□ -0.86
USB1-212ENST00000566082 DPTQ07507 201 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 OR10K2Q6IF99 312 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 SLC29A4Q7RTT9 530 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 C12orf40Q86WS4 652 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 CDH26Q8IXH8 852 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 MFSD8Q8NHS3 518 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 PTP4A1Q93096 173 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 GIMAP5Q96F15 307 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 ADGRL4Q9HBW9 690 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 ACKR4Q9NPB9 350 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 C19orf53Q9UNZ5 99 aaPredicted RBP9.65□□□□□ -0.86
USB1-212ENST00000566082 PRAMEF27A3QJZ7 478 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 OR5H14A6NHG9 310 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 CTNSO60931 367 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 ZFPL1O95159 310 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 APBB3O95704 486 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 PMS2P2O95744 297 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 LAMTOR1Q6IAA8 161 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 COX15Q7KZN9 410 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 RAB11FIP2Q7L804 512 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 NPRL2Q8WTW4 380 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 C3orf49Q96BT1 292 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 SBF1O95248 1867 aa9.65□□□□□ -0.86
USB1-212ENST00000566082 A0A0G2JMZ2 1700 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 LRRC37A2A6NM11 1700 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 PRSS38A1L453 326 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 SYT7O43581 403 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 TBX19O60806 448 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 CALCBP10092 127 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 CBR1P16152 277 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 TBXA2RP21731 343 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 CBX5P45973 191 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 CYCSP99999 105 aaKnown RBP9.65□□□□□ -0.87
USB1-212ENST00000566082 PLCXD2Q0VAA5 305 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 SNTB1Q13884 538 aaKnown RBP9.65□□□□□ -0.87
USB1-212ENST00000566082 MLC1Q15049 377 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 TMEM65Q6PI78 240 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 TRILQ7L0X0 811 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 TRAPPC6BQ86SZ2 158 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 LINC00615Q96LM1 132 aaPredicted RBP9.65□□□□□ -0.87
USB1-212ENST00000566082 ZBP1Q9H171 429 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 FGF22Q9HCT0 170 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 NTMQ9P121 344 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 ACAD8Q9UKU7 415 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 HCFC2Q9Y5Z7 792 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 MYOFQ9NZM1 2061 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 PLXNA1Q9UIW2 1896 aa9.65□□□□□ -0.87
USB1-212ENST00000566082 CEP350Q5VT06 3117 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms