RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 C2CD4DB7Z1M9 353 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 KLF4O43474 513 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 RDH16O75452 317 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 OR2F2O95006 317 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 CH25HO95992 272 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 CD1AP06126 327 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 UCHL1P09936 223 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 RAB40ALP0C0E4 278 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 NT5EP21589 574 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 NOS3P29474 1203 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 TRHRP34981 398 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 PPIAP62937 165 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 ACTC1P68032 377 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 ACTA1P68133 377 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 OR2F1Q13607 317 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 DECR1Q16698 335 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 MANEAQ5SRI9 462 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 RNF44Q7L0R7 432 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 MEX3DQ86XN8 651 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 SFTPA2Q8IWL1 248 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 RAB40AQ8WXH6 277 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 WDR89Q96FK6 387 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 CRB3Q9BUF7 120 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 SEBOXQ9HB31 216 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 KLHL28Q9NXS3 571 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 CNIH4Q9P003 139 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF629Q9UEG4 869 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 SLC22A31A6NKX4 558 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 BCL2L11O43521 198 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 CELA2BP08218 269 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 TBXA2RP21731 343 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 CCR5P51681 352 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 ID2Q02363 134 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 DUSP5Q16690 384 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 ARHGAP11BQ3KRB8 267 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 Q3ZCU0 254 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 RNF212Q495C1 297 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 FAM74A1Q5RGS3 127 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 FHL5Q5TD97 284 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 KIAA0895LQ68EN5 471 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 PRSS41Q7RTY9 318 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 KRT77Q7Z794 578 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 JAZF1Q86VZ6 243 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 TMEM151BQ8IW70 566 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 TMEFF1Q8IYR6 380 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 IZUMO1Q8IYV9 350 aa12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 ACOT11Q8WXI4 607 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 TINAGL1Q9GZM7 467 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 MTHFD2LQ9H903 347 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF443Q9Y2A4 671 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-220ENST00000560998 A0A0J9YY10 115 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 PMS2P1A4D2B8 440 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 NTN1O95631 604 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 IGLV3-19P01714 112 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 IGHV2-70P01814 119 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 FBP1P09467 338 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 VSIG10L2P0DP72 767 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 PTGFRP43088 359 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 ARHGDIBP52566 201 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 RGS8P57771 180 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 MELKQ14680 651 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 TRMT12Q53H54 448 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF542PQ5EBM4 170 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 MTFR2Q6P444 385 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 FAM199XQ6PEV8 388 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 OR2W3Q7Z3T1 314 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 FRMD1Q8N878 549 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 OR10H4Q8NGA5 316 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 SLC37A2Q8TED4 501 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 SLC39A7Q92504 469 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 EDAQ92838 391 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 FAM117AQ9C073 453 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 IL21RQ9HBE5 538 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 NRIP3Q9NQ35 241 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 NIT2Q9NQR4 276 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 HRASLS2Q9NWW9 162 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 C19orf53Q9UNZ5 99 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 NTNG1Q9Y2I2 539 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 WDR45Q9Y484 360 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 A0A0B4J203 849 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 KIR2DS5A0A0G2JLQ3 304 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 A0A0G2JNG1 304 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF879B4DU55 563 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 E9PI62 339 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 KIR2DS3K7RE56 304 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 CYR61O00622 381 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 PRF1P14222 555 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 HCCSP53701 268 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 SORDQ00796 357 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 KIR2DS5Q14953 304 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 CDNFQ49AH0 187 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 EXOSC6Q5RKV6 272 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF836Q6ZNA1 936 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 SLC16A13Q7RTY0 426 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 SHISA5Q8N114 240 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 TMEM52Q8NDY8 209 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 C17orf47Q8NEP4 570 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 SLC2A12Q8TD20 617 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 RXFP4Q8TDU9 374 aa12.74□□□□□ -0.37
RABGGTA-220ENST00000560998 GHSRQ92847 366 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms