RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 SLC6A8P48029 635 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 COPZ1P61923 177 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 PIGFQ07326 219 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 CDK5R2Q13319 367 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 PON3Q15166 354 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 BEX5Q5H9J7 111 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 ULK3Q6PHR2 472 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 LINC00114Q6XXX2 140 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 PHC2Q8IXK0 858 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 ENTHD1Q8IYW4 607 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 PIGXQ8TBF5 258 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 C3orf49Q96BT1 292 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 NPAS1Q99742 590 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 TMEM204Q9BSN7 226 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 LAT2Q9GZY6 243 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 SELENONQ9NZV5 590 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 RPS6KB2Q9UBS0 482 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 ZNF175Q9Y473 711 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 CUBNO60494 3623 aa9.92□□□□□ -0.82
RABGGTA-204ENST00000558376 OR2M5A3KFT3 312 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 RNF212BA8MTL3 300 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 RNF223E7ERA6 249 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 HS3ST1O14792 307 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 CHP2O43745 196 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 XPNPEP2O43895 674 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 DBPQ10586 325 aaPredicted RBP9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 CLEC12AQ5QGZ9 265 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 RAET1LQ5VY80 246 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 ACSM5Q6NUN0 579 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 STAC2Q6ZMT1 411 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 PARP8Q8N3A8 854 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 LRRC17Q8N6Y2 441 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 ZNF611Q8N823 705 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 BPIFB6Q8NFQ5 453 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 ZNF563Q8TA94 476 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 FAM81AQ8TBF8 368 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 GNPDA2Q8TDQ7 276 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 DTNBP1Q96EV8 351 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 ANKRD19PQ9H560 264 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 AMBNQ9NP70 447 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 PPP4R1LQ9P1A2 415 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 MYRFQ9Y2G1 1151 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 YLPM1P49750 1951 aaKnown RBP9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 A0A1W2PQD3 144 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 PTGES3LE9PB15 166 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 TNFAIP8O95379 198 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 TACR3P29371 465 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 GGT2P36268 569 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 BLMHQ13867 455 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 GINS1Q14691 196 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 C6orf141Q5SZD1 244 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 FAM214BQ7L5A3 538 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 BCDIN3DQ7Z5W3 292 aaKnown RBP9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 OR8D4Q8NGM9 314 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 APH1BQ8WW43 257 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 BPIFA2Q96DR5 249 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 PLPPR2Q96GM1 343 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 IL4I1Q96RQ9 567 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 RHNO1Q9BSD3 238 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 PLSCR4Q9NRQ2 329 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 SCOCQ9UIL1 159 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 CLEC4AQ9UMR7 237 aa9.91□□□□□ -0.82
RABGGTA-204ENST00000558376 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.9□□□□□ -0.822e-6■■□□□ 14.3
RABGGTA-204ENST00000558376 A0A087WUJ7 227 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 ZAR1LA6NP61 321 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 SHISA8B8ZZ34 492 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 H3BML4 177 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 WBP4O75554 376 aaKnown RBP9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 SMIM18P0DKX4 95 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 LCN1P31025 176 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 IFNGR2P38484 337 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 GIPRP48546 466 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 ESRRGP62508 458 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 PSPHP78330 225 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 PRKCDQ05655 676 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 COX10Q12887 443 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 TSPAN31Q12999 210 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 MAD2L1BPQ15013 274 aaPredicted RBP9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 ZSWIM7Q19AV6 140 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 CLEC12BQ2HXU8 276 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 WBP2NLQ6ICG8 309 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 CD300LDQ6UXZ3 194 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 WFDC8Q8IUA0 241 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 CCDC103Q8IW40 242 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 LINC00471Q8N535 108 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 OR51A7Q8NH64 312 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 OR5W2Q8NH69 310 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 LILRB1Q8NHL6 650 aaPredicted RBP9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 B4GALNT2Q8NHY0 566 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 GPR119Q8TDV5 335 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 AKAP1Q92667 903 aaKnown RBP eCLIP9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 PITX2Q99697 317 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 APOL4Q9BPW4 351 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 POLR2J2Q9GZM3 115 aaKnown RBP9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 ZNF696Q9H7X3 374 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 EXOSC3Q9NQT5 275 aaKnown RBP9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 MED31Q9Y3C7 131 aa9.9□□□□□ -0.82
RABGGTA-204ENST00000558376 IGKV1D-42A0A075B6H8 117 aa9.89□□□□□ -0.83
RABGGTA-204ENST00000558376 TRAV27A0A087WT01 109 aa9.89□□□□□ -0.83
RABGGTA-204ENST00000558376 DPPA5A6NC42 116 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms