RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 MAP3K8P41279 467 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 CXCL12P48061 93 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 CSNK1A1P48729 337 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 GDI2P50395 445 aaKnown RBP0.63□□□□□ -2.31
FOXN3-216ENST00000557496 RPS21P63220 83 aaKnown RBP0.63□□□□□ -2.31
FOXN3-216ENST00000557496 TNFRSF9Q07011 255 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 AQP6Q13520 282 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 VGLL4Q14135 290 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 GAMTQ14353 236 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 ZNF235Q14590 738 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 GINS1Q14691 196 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 ZFP1Q6P2D0 407 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 LRRC8BQ6P9F7 803 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 CEMP1Q6PRD7 247 aaPredicted RBP0.63□□□□□ -2.31
FOXN3-216ENST00000557496 ZNF493Q6ZR52 646 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 RABEPKQ7Z6M1 372 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 MISPQ8IVT2 679 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 CLEC4FQ8N1N0 589 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 SPC24Q8NBT2 197 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 GMCL1P1Q8NEA9 526 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 ABHD3Q8WU67 409 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 GEMIN6Q8WXD5 167 aaKnown RBP0.63□□□□□ -2.31
FOXN3-216ENST00000557496 CREB3L1Q96BA8 519 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 C14orf79Q96F83 325 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 ATP6V0BQ99437 205 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 SHANK2-AS3Q9BTD1 123 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 ZSCAN5AQ9BUG6 496 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 FRMD8P1Q9BZ68 369 aaPredicted RBP0.63□□□□□ -2.31
FOXN3-216ENST00000557496 PACSIN2Q9UNF0 486 aaPredicted RBP0.63□□□□□ -2.31
FOXN3-216ENST00000557496 PSG8Q9UQ74 426 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 SIGLEC7Q9Y286 467 aa0.63□□□□□ -2.31
FOXN3-216ENST00000557496 SCN1AP35498 2009 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 A0A0U1RQV1 116 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 ZNF98A6NK75 572 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 RASGRF2O14827 1237 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 KMOO15229 486 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 TBX19O60806 448 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 GCM2O75603 506 aaPredicted RBP0.62□□□□□ -2.31
FOXN3-216ENST00000557496 MT-ATP6P00846 226 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 APCSP02743 223 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 GAPDHP04406 335 aaKnown RBP0.62□□□□□ -2.31
FOXN3-216ENST00000557496 FUT1P19526 365 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 GSSP48637 474 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 CRYBB1P53674 252 aaPredicted RBP0.62□□□□□ -2.31
FOXN3-216ENST00000557496 CDH4P55283 916 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 ARG2P78540 354 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 CBX3Q13185 183 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 PON3Q15166 354 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 SLC15A2Q16348 729 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 SMUG1Q53HV7 270 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 BEND3Q5T5X7 828 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 SAXO2Q658L1 398 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 PRMT9Q6P2P2 845 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 CATSPER4Q7RTX7 472 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 ANKRD23Q86SG2 305 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 MOB3BQ86TA1 216 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 ACOT1Q86TX2 421 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 ELMOD2Q8IZ81 293 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 NOXO1Q8NFA2 376 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 OR5M1Q8NGP8 315 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 C15orf40Q8WUR7 153 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 FAM3CQ92520 227 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 ATP6V1E2Q96A05 226 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 GBA3Q9H227 469 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 REEP4Q9H6H4 257 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 SLC17A5Q9NRA2 495 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 FBXO6Q9NRD1 293 aaPredicted RBP0.62□□□□□ -2.31
FOXN3-216ENST00000557496 THUMPD1Q9NXG2 353 aaKnown RBP0.62□□□□□ -2.31
FOXN3-216ENST00000557496 GIN1Q9NXP7 522 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.62□□□□□ -2.31
FOXN3-216ENST00000557496 IL19Q9UHD0 177 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 MMP17Q9ULZ9 603 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 MGAT4BQ9UQ53 548 aa0.62□□□□□ -2.31
FOXN3-216ENST00000557496 IGKV1D-13A0A0B4J2D9 117 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 A0A1B0GVI7 797 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 CCER2I3L3R5 266 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 BPY2O14599 106 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 YIF1AO95070 293 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 HLA-DQA1P01909 254 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 IGKV1-13P0DP09 117 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 TGFBR2P37173 567 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 CCR8P51685 355 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 RBX1P62877 108 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 NCBP1Q09161 790 aaKnown RBP0.61□□□□□ -2.31
FOXN3-216ENST00000557496 KDM8Q8N371 416 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 ACOT4Q8N9L9 421 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 ZNF680Q8NEM1 530 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 STXBP6Q8NFX7 210 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 OR13G1Q8NGZ3 307 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 COQ8AQ8NI60 647 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 CIRBP-AS1Q8TBR5 109 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 SAMD8Q96LT4 415 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 CCDC43Q96MW1 224 aaKnown RBP0.61□□□□□ -2.31
FOXN3-216ENST00000557496 OXGR1Q96P68 337 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 RIT2Q99578 217 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 MRPL13Q9BYD1 178 aaKnown RBP0.61□□□□□ -2.31
FOXN3-216ENST00000557496 RAB17Q9H0T7 212 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 LY9Q9HBG7 655 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 SGK2Q9HBY8 427 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 IL36GQ9NZH8 169 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms