RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 WFDC6Q9BQY6 131 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 FNDC11Q9BVV2 318 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 OSBPL10Q9BXB5 764 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 POTEKPQ9BYX7 375 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 PAQR5Q9NXK6 330 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-213ENST00000550629 DNAJB9Q9UBS3 223 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 OSGIN1Q9UJX0 560 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 A4GNTQ9UNA3 340 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 AURKCQ9UQB9 309 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 VDAC3Q9Y277 283 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 TRAPPC4Q9Y296 219 aa5.14□□□□□ -1.59
SCAF11-213ENST00000550629 TNRC6AQ8NDV7 1962 aaKnown RBP5.14□□□□□ -1.59
SCAF11-213ENST00000550629 ZFYVE26Q68DK2 2539 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 TMED7-TICAM2A0A0A6YYA0 188 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 ARRDC5A6NEK1 342 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 CPSF4LA6NMK7 179 aaKnown RBP5.13□□□□□ -1.59
SCAF11-213ENST00000550629 NPIPA5E9PKD4 350 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 hCG_2039718K7EN88 272 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 CLOCKO15516 846 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 OR2T1O43869 369 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 GMFGO60234 142 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 NPIPB7O75200 414 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 ENTPD5O75356 428 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 CST1P01037 141 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 LDLRP01130 860 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 PEPDP12955 493 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF708P17019 499 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 FASP25445 335 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 PTGER4P35408 488 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 IFNGR2P38484 337 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 LHX2P50458 406 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 TDGF1P3P51864 188 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 KRTAP10-11P60412 298 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 RBPJQ06330 500 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 CRYZQ08257 329 aaKnown RBP5.13□□□□□ -1.59
SCAF11-213ENST00000550629 MFSD13AQ14CX5 517 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 ATP6AP1Q15904 470 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 SYT14P1Q58G82 188 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 PDSS1Q5T2R2 415 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF788Q6ZQV5 615 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 MBOAT2Q6ZWT7 520 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 ACOT11Q8WXI4 607 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-213ENST00000550629 ABTB1Q969K4 478 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF524Q96C55 264 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 NRBF2Q96F24 287 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 KLHDC3Q9BQ90 382 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 PRSS27Q9BQR3 290 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 FUZQ9BT04 418 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 KLHL4Q9C0H6 718 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 DEFB127Q9H1M4 99 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 REEP1Q9H902 201 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 S100A14Q9HCY8 104 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 KRCC1Q9NPI7 259 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-213ENST00000550629 TIGARQ9NQ88 270 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 CTPS2Q9NRF8 586 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 MAN2C1Q9NTJ4 1040 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 SERTAD4Q9NUC0 356 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 ASF1BQ9NVP2 202 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 TMCC3Q9ULS5 477 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 SLC7A7Q9UM01 511 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 NPIPA1Q9UND3 350 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 TMEM5Q9Y2B1 443 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 NTNG1Q9Y2I2 539 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 RPH3AQ9Y2J0 694 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-213ENST00000550629 TMED7Q9Y3B3 224 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 HDGFL3Q9Y3E1 203 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF337Q9Y3M9 751 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 V9GYQ6 96 aa5.13□□□□□ -1.59
SCAF11-213ENST00000550629 ATRXP46100 2492 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 IGKV1D-42A0A075B6H8 117 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 TRAV36DV7A0A075B6V5 113 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 SH3PXD2BA1X283 911 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 ANKRD65E5RJM6 399 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 H3BNX3 289 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 TNFRSF11BO00300 401 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 GNGT2O14610 69 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 EFNA2O43921 213 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 EIF1BO60739 113 aaKnown RBP5.12□□□□□ -1.59
SCAF11-213ENST00000550629 WDR1O75083 606 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 GADD45GO95257 159 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 AHSA1O95433 338 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 PMS2P2O95744 297 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 MT-ATP6P00846 226 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 MT-ND1P03886 318 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 THY1P04216 161 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 GRPP07492 148 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 FCGR2AP12318 317 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 PCSK6P29122 969 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 RRM2P31350 389 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 IDUAP35475 653 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 ARHGDIAP52565 204 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 CTBP2P56545 445 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 CLDN18P56856 261 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 RPS3AP61247 264 aaKnown RBP5.12□□□□□ -1.59
SCAF11-213ENST00000550629 RAB1AP62820 205 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 CSNK2A1P68400 391 aaPredicted RBP5.12□□□□□ -1.59
SCAF11-213ENST00000550629 ELF3P78545 371 aaPredicted RBP5.12□□□□□ -1.59
SCAF11-213ENST00000550629 SPIBQ01892 262 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 MYBPHQ13203 477 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 RIPK1Q13546 671 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms