RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 CDV3Q9UKY7 258 aaKnown RBP16.05■□□□□ 0.16
RAB40C-205ENST00000539661 A0A1B0GTI1 187 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 OR6C68A6NDL8 312 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 SIGLEC5O15389 551 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 LDB3O75112 727 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 UPK3AO75631 287 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 RPL4P36578 427 aaKnown RBP16.04■□□□□ 0.16
RAB40C-205ENST00000539661 PPIAP62937 165 aaKnown RBP16.04■□□□□ 0.16
RAB40C-205ENST00000539661 SIGLEC14Q08ET2 396 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 TOMM20Q15388 145 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 LINC01590Q5TEZ4 76 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 ULK3Q6PHR2 472 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 PGAP1Q75T13 922 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 SLC16A9Q7RTY1 509 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 OR2W3Q7Z3T1 314 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 C12orf40Q86WS4 652 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 OR5M8Q8NGP6 311 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 STK35Q8TDR2 534 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 PTCHD1Q96NR3 888 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 POTEKPQ9BYX7 375 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 CHST6Q9GZX3 395 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 GAREM1Q9H706 876 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 TMEM185BQ9H7F4 350 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 BIN3Q9NQY0 253 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 COA4Q9NYJ1 87 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 ADAM18Q9Y3Q7 739 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 TMEM218A2RU14 115 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 OR5H14A6NHG9 310 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 PRR32B1ATL7 298 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 C1QTNF3-AMACRE9PGA6 284 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 RPL35P42766 123 aaKnown RBP16.04■□□□□ 0.16
RAB40C-205ENST00000539661 RAB13P51153 203 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 AKR1D1P51857 326 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 NKAIN2Q5VXU1 208 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 CNKSR3Q6P9H4 555 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 HAGHLQ6PII5 290 aaPredicted RBP16.04■□□□□ 0.16
RAB40C-205ENST00000539661 FKRPQ9H9S5 495 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 EPHA6Q9UF33 1036 aa16.04■□□□□ 0.16
RAB40C-205ENST00000539661 MUC22E2RYF6 1773 aaPredicted RBP16.04■□□□□ 0.16
RAB40C-205ENST00000539661 TMEM82A0PJX8 343 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 OR14I1A6ND48 311 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 IGLON5A6NGN9 336 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 PRRT4C9JH25 899 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 F8W036 122 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 SULT1C2O00338 296 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 SRPX2O60687 465 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-205ENST00000539661 KCNJ13O60928 360 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 CD3DP04234 171 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 SMIM10L1P0DMW3 83 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 GPR143P51810 404 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 LUMP51884 338 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-205ENST00000539661 SNTB1Q13884 538 aaKnown RBP16.03■□□□□ 0.16
RAB40C-205ENST00000539661 C11orf87Q6NUJ2 197 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 STEAP2Q8NFT2 490 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 THRSPQ92748 146 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 SMIM10Q96HG1 83 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 ALG12Q9BV10 488 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 FAM117AQ9C073 453 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 DNAJB12Q9NXW2 375 aaKnown RBP16.03■□□□□ 0.16
RAB40C-205ENST00000539661 FRRS1LQ9P0K9 344 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 DAPP1Q9UN19 280 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 PLEKHM1Q9Y4G2 1056 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 SNRNP200O75643 2136 aaKnown RBP16.03■□□□□ 0.16
RAB40C-205ENST00000539661 ARPC4-TTLL3A0A0A6YYG9 625 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 PSMD9O00233 223 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 B3GALT2O43825 422 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 GUSBP08236 651 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 SLC35G6P0C7Q6 338 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 SOX2P48431 317 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 TAS2R19P59542 299 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 PLA2G7Q13093 441 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 ENPP7Q6UWV6 458 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 Q96M85 177 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 WDR13Q9H1Z4 485 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 COMMD9Q9P000 198 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 SLC22A7Q9Y694 548 aa16.03■□□□□ 0.16
RAB40C-205ENST00000539661 TP53BP1Q12888 1972 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-205ENST00000539661 CDC40O60508 579 aaKnown RBP eCLIP16.02■□□□□ 0.16
RAB40C-205ENST00000539661 WNT11O96014 354 aa16.02■□□□□ 0.16
RAB40C-205ENST00000539661 APOC1P02654 83 aa16.02■□□□□ 0.16
RAB40C-205ENST00000539661 GABRA3P34903 492 aa16.02■□□□□ 0.16
RAB40C-205ENST00000539661 SLC25A1P53007 311 aa16.02■□□□□ 0.16
RAB40C-205ENST00000539661 RUNX2Q13950 521 aa16.02■□□□□ 0.16
RAB40C-205ENST00000539661 LIPNQ5VXI9 398 aa16.02■□□□□ 0.16
RAB40C-205ENST00000539661 ACOT7LQ6ZUV0 252 aa16.02■□□□□ 0.16
RAB40C-205ENST00000539661 LURAP1LQ8IV03 231 aa16.02■□□□□ 0.16
RAB40C-205ENST00000539661 GABRG1Q8N1C3 465 aa16.02■□□□□ 0.16
RAB40C-205ENST00000539661 GPX8Q8TED1 209 aa16.02■□□□□ 0.16
RAB40C-205ENST00000539661 GPX7Q96SL4 187 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-205ENST00000539661 SFXN1Q9H9B4 322 aa16.02■□□□□ 0.16
RAB40C-205ENST00000539661 WSB2Q9NYS7 404 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-205ENST00000539661 MRM2Q9UI43 246 aaKnown RBP16.02■□□□□ 0.16
RAB40C-205ENST00000539661 KCNK6Q9Y257 313 aa16.02■□□□□ 0.16
RAB40C-205ENST00000539661 ZNF337Q9Y3M9 751 aa16.02■□□□□ 0.16
RAB40C-205ENST00000539661 TRAV18A0A075B6X5 111 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 HIDE1A8MVS5 230 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 PRSS44E7EML9 344 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 RPP14O95059 124 aaKnown RBP16.02■□□□□ 0.15
RAB40C-205ENST00000539661 ADH1CP00326 375 aa16.02■□□□□ 0.15
RAB40C-205ENST00000539661 MAS1P04201 325 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms