RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 TMEM160Q9NX00 188 aa17.09■□□□□ 0.33
SFXN1-203ENST00000502393 CDC42EP3Q9UKI2 254 aa17.09■□□□□ 0.33
SFXN1-203ENST00000502393 POFUT2Q9Y2G5 429 aa17.09■□□□□ 0.33
SFXN1-203ENST00000502393 SONP18583 2426 aaKnown RBP17.09■□□□□ 0.33
SFXN1-203ENST00000502393 ARFGEF3Q5TH69 2177 aa17.08■□□□□ 0.33
SFXN1-203ENST00000502393 CPSF4LA6NMK7 179 aaKnown RBP17.08■□□□□ 0.32
SFXN1-203ENST00000502393 SEC14L2O76054 403 aa17.08■□□□□ 0.32
SFXN1-203ENST00000502393 ADORA3P0DMS8 318 aa17.08■□□□□ 0.32
SFXN1-203ENST00000502393 IGHV4-31P0DP07 118 aa17.08■□□□□ 0.32
SFXN1-203ENST00000502393 THBS4P35443 961 aa17.08■□□□□ 0.32
SFXN1-203ENST00000502393 NR4A2P43354 598 aa17.08■□□□□ 0.32
SFXN1-203ENST00000502393 CAMK2DQ13557 499 aa17.08■□□□□ 0.32
SFXN1-203ENST00000502393 TTC33Q6PID6 262 aaPredicted RBP17.08■□□□□ 0.32
SFXN1-203ENST00000502393 ANKS4BQ8N8V4 417 aa17.08■□□□□ 0.32
SFXN1-203ENST00000502393 SLC26A7Q8TE54 656 aa17.08■□□□□ 0.32
SFXN1-203ENST00000502393 MPP4Q96JB8 637 aa17.08■□□□□ 0.32
SFXN1-203ENST00000502393 KCNK17Q96T54 332 aa17.08■□□□□ 0.32
SFXN1-203ENST00000502393 ULBP2Q9BZM5 246 aa17.08■□□□□ 0.32
SFXN1-203ENST00000502393 RAB1BQ9H0U4 201 aa17.08■□□□□ 0.32
SFXN1-203ENST00000502393 PCDHAC1Q9H158 963 aa17.08■□□□□ 0.32
SFXN1-203ENST00000502393 DENND2DQ9H6A0 471 aaPredicted RBP17.08■□□□□ 0.32
SFXN1-203ENST00000502393 TRAPPC13A5PLN9 417 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 hCG_2039718K7EN88 272 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 OR6A2O95222 327 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 LYPD3O95274 346 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 HLA-HP01893 362 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 THY1P04216 161 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 CD79AP11912 226 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 H2AFXP16104 143 aaPredicted RBP17.07■□□□□ 0.32
SFXN1-203ENST00000502393 CD247P20963 164 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 ZP4Q12836 540 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 CYLC2Q14093 348 aaPredicted RBP17.07■□□□□ 0.32
SFXN1-203ENST00000502393 DAG1Q14118 895 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 ZNF74Q16587 644 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 GSG1Q2KHT4 349 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 VMACQ2NL98 169 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 WDR88Q6ZMY6 472 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 ZNF813Q6ZN06 617 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 CCDC80Q76M96 950 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 RBM45Q8IUH3 476 aaKnown RBP17.07■□□□□ 0.32
SFXN1-203ENST00000502393 WDFY1Q8IWB7 410 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 ZNF540Q8NDQ6 660 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 OR4D11Q8NGI4 311 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 SPATA3Q8NHX4 192 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 TAMM41Q96BW9 452 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 DOK1Q99704 481 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 SH3GL1Q99961 368 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 SLC19A3Q9BZV2 496 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 NOX3Q9HBY0 568 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 NANSQ9NR45 359 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 MRGBPQ9NV56 204 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 SLC7A7Q9UM01 511 aa17.07■□□□□ 0.32
SFXN1-203ENST00000502393 C11orf98E9PRG8 122 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 SERPINI2O75830 405 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 CH25HO95992 272 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 ERCC1P07992 297 aaPredicted RBP17.06■□□□□ 0.32
SFXN1-203ENST00000502393 VIMP08670 466 aaKnown RBP17.06■□□□□ 0.32
SFXN1-203ENST00000502393 IFNGR1P15260 489 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 CSNK1A1P48729 337 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 GZMKP49863 264 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 GZMMP51124 257 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 BIDP55957 195 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 GGTLC2Q14390 218 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 TRMT5Q32P41 509 aaKnown RBP17.06■□□□□ 0.32
SFXN1-203ENST00000502393 NANOGP8Q6NSW7 305 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 SPATA21Q7Z572 469 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 OR6X1Q8NH79 312 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 VANGL1Q8TAA9 524 aaPredicted RBP17.06■□□□□ 0.32
SFXN1-203ENST00000502393 FOXN4Q96NZ1 517 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 FOXB1Q99853 325 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 ZNF426Q9BUY5 554 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 NANOGQ9H9S0 305 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 TAS2R5Q9NYW4 299 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 ZNF229Q9UJW7 825 aa17.06■□□□□ 0.32
SFXN1-203ENST00000502393 TMEM129A0AVI4 362 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 FBP2O00757 339 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 FAM157CP0CG43 387 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 B4GALT1P15291 398 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 ZNF14P17017 642 aaPredicted RBP17.05■□□□□ 0.32
SFXN1-203ENST00000502393 NR4A1P22736 598 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 PIGFQ07326 219 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 CARTPTQ16568 116 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 KRT80Q6KB66 452 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 SLC35D2Q76EJ3 337 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 SVOPLQ8N434 492 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 NEU4Q8WWR8 484 aaPredicted RBP17.05■□□□□ 0.32
SFXN1-203ENST00000502393 TMEM54Q969K7 222 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 ZNF75AQ96N20 296 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 TMEM120AQ9BXJ8 343 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 LPAR3Q9UBY5 353 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 CMAHPQ9Y471 501 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 YLPM1P49750 1951 aaKnown RBP17.05■□□□□ 0.32
SFXN1-203ENST00000502393 SVEP1Q4LDE5 3571 aa17.05■□□□□ 0.32
SFXN1-203ENST00000502393 RNF13O43567 381 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 UBL3O95164 117 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 NPPAP01160 153 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 HIST1H2ABP04908 130 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 EVX1P49640 407 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 RAB1AP62820 205 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 SNTB2Q13425 540 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms