RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 MAIP1Q8WWC4 291 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 RTN4IP1Q8WWV3 396 aaPredicted RBP0.75□□□□□ -2.29
CCDC93-209ENST00000488908 UFD1Q92890 307 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 CCDC47Q96A33 483 aaKnown RBP0.75□□□□□ -2.29
CCDC93-209ENST00000488908 TM4SF18Q96CE8 201 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 NARS2Q96I59 477 aaKnown RBP0.75□□□□□ -2.29
CCDC93-209ENST00000488908 WFIKKN1Q96NZ8 548 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 ZNF382Q96SR6 550 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 CHAC1Q9BUX1 264 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 EDEM2Q9BV94 578 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 OSBPL10Q9BXB5 764 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 CAPS2Q9BXY5 557 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 RPH3ALQ9UNE2 315 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 PACSIN2Q9UNF0 486 aaPredicted RBP0.75□□□□□ -2.29
CCDC93-209ENST00000488908 PIN4Q9Y237 131 aaKnown RBP0.75□□□□□ -2.29
CCDC93-209ENST00000488908 OR10H1Q9Y4A9 318 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 N6AMT1Q9Y5N5 214 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 F11RQ9Y624 299 aaKnown RBP0.75□□□□□ -2.29
CCDC93-209ENST00000488908 U3KQV3 271 aa0.75□□□□□ -2.29
CCDC93-209ENST00000488908 SF3B1O75533 1304 aaKnown RBP eCLIP0.74□□□□□ -2.29
CCDC93-209ENST00000488908 A0A087WZY1 265 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 A0A0B4J2A0 478 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 TRIM64A6NGJ6 449 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 TRIM64BA6NI03 449 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 A8MUU9 505 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 SGK1O00141 431 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 BTN3A3O00478 584 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 MAPK13O15264 365 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 RGS16O15492 202 aaPredicted RBP0.74□□□□□ -2.29
CCDC93-209ENST00000488908 POLR2DO15514 142 aaKnown RBP0.74□□□□□ -2.29
CCDC93-209ENST00000488908 OR1F1O43749 312 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 MGRN1O60291 552 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 UPK3AO75631 287 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 OXSR1O95747 527 aaPredicted RBP0.74□□□□□ -2.29
CCDC93-209ENST00000488908 OPN1MWP04001 364 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 OR56A5P0C7T3 313 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 P0C880 135 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 HSMCR30P0CW71 290 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 ARL14EPLP0DKL9 152 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 OPN1MW2P0DN77 364 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 OPN1MW3P0DN78 364 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 FOLR1P15328 257 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 TCN1P20061 433 aaPredicted RBP0.74□□□□□ -2.29
CCDC93-209ENST00000488908 PCMT1P22061 227 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 MMP11P24347 488 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 CYP2F1P24903 491 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 PSMD8P48556 350 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 CCR8P51685 355 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 SUB1P53999 127 aaKnown RBP eCLIP0.74□□□□□ -2.29
CCDC93-209ENST00000488908 CRISP1P54107 249 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 LOXL1Q08397 574 aaPredicted RBP0.74□□□□□ -2.29
CCDC93-209ENST00000488908 CDC20Q12834 499 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 PDIA2Q13087 525 aaKnown RBP0.74□□□□□ -2.29
CCDC93-209ENST00000488908 AQP6Q13520 282 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 GANABQ14697 944 aaKnown RBP0.74□□□□□ -2.29
CCDC93-209ENST00000488908 RABL6Q3YEC7 729 aaPredicted RBP0.74□□□□□ -2.29
CCDC93-209ENST00000488908 CARD16Q5EG05 197 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 SLC10A5Q5PT55 438 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 VAX1Q5SQQ9 334 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 RAB12Q6IQ22 244 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 C1orf94Q6P1W5 598 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 PLBD1Q6P4A8 553 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 KCNIP4Q6PIL6 250 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 NTM-AS1Q6ZSK4 140 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 THOC6Q86W42 341 aaKnown RBP0.74□□□□□ -2.29
CCDC93-209ENST00000488908 ZNF573Q86YE8 665 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 GRAMD2AQ8IUY3 354 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 ZADH2Q8N4Q0 377 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 FADS6Q8N9I5 356 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 IPMKQ8NFU5 416 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 OR1F12Q8NHA8 337 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 MGARPQ8TDB4 240 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 RNF139Q8WU17 664 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 MRPL38Q96DV4 380 aaKnown RBP0.74□□□□□ -2.29
CCDC93-209ENST00000488908 PELI1Q96FA3 418 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 AMDHD1Q96NU7 426 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 CLCC1Q96S66 551 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 CAMK2N2Q96S95 79 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 RNF2Q99496 336 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 RNF5Q99942 180 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 GABARAPL3Q9BY60 117 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 HSD3B7Q9H2F3 369 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 HOXC10Q9NYD6 342 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 NINJ2Q9NZG7 142 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 PCSK1NQ9UHG2 260 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 SHPKQ9UHJ6 478 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 MFHAS1Q9Y4C4 1052 aa0.74□□□□□ -2.29
CCDC93-209ENST00000488908 YEATS2Q9ULM3 1422 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 CENPJQ9HC77 1338 aaPredicted RBP0.73□□□□□ -2.29
CCDC93-209ENST00000488908 DOCK8Q8NF50 2099 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 TCRBV9S1A1TA0A576 114 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 CIB4A0PJX0 185 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 LRP5LA4QPB2 252 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 A8MUI8 341 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 FOXE1O00358 373 aaPredicted RBP0.73□□□□□ -2.29
CCDC93-209ENST00000488908 MED7O43513 233 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 CCNKO75909 580 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 NEBLO76041 1014 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 GABARAPO95166 117 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 PTBP3O95758 552 aaKnown RBP0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms