RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 EXOSC3Q9NQT5 275 aaKnown RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 FBXO6Q9NRD1 293 aaPredicted RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 OBP2AQ9NY56 170 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 NPAP1Q9NZP6 1156 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 ZNF337Q9Y3M9 751 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 TRAV36DV7A0A075B6V5 113 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 A0A1B0GUH1 482 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 COX7A2P2O60397 106 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 OR2J2O76002 312 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 C6orf47O95873 294 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 CRHP06850 196 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SLC10A3P09131 477 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 GRB10Q13322 594 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 RNF220Q5VTB9 566 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 GDF6Q6KF10 455 aaPredicted RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 SLC22A24Q8N4F4 322 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 OR4C16Q8NGL9 310 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 C7orf43Q8WVR3 580 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 CELF6Q96J87 481 aaKnown RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 WDR92Q96MX6 357 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 THAP2Q9H0W7 228 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SPATA31A5Q5VU36 1347 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 FMO6PO60774 539 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 MRPL33O75394 65 aaKnown RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 ZFAND5O76080 213 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 PLATP00750 562 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SNRPBP14678 240 aaKnown RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 POU2F1P14859 743 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 CD80P33681 288 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 HIST1H3AP68431 136 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SMIM21Q3B7S5 101 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 TEX44Q53QW1 395 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 ZNF766Q5HY98 468 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 C9orf152Q5JTZ5 239 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 TMIGD1Q6UXZ0 262 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 CDHR3Q6ZTQ4 885 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 OVCH1Q7RTY7 1134 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 CNEP1R1Q8N9A8 125 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 LNX1Q8TBB1 728 aaPredicted RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 MYOZ3Q8TDC0 251 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 NTNG2Q96CW9 530 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 TMPRSS13Q9BYE2 586 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 RNF38Q9H0F5 515 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 CA10Q9NS85 328 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 OSER1Q9NX31 292 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 MTCH1Q9NZJ7 389 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 GFRA2O00451 464 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 OR2C1O95371 312 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 DRD1P21728 446 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 DUSP1P28562 367 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 CD1CP29017 333 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 OTX2P32243 289 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SOX10P56693 466 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 GBE1Q04446 702 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 VMA21Q3ZAQ7 101 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 YIF1BQ5BJH7 314 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 FAM209BQ5JX69 171 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 PPP1R26Q5T8A7 1209 aaPredicted RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 CPEB2Q7Z5Q1 589 aaKnown RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 FMR1NBQ8N0W7 255 aaPredicted RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 SLC26A10Q8NG04 563 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SLCO4A1Q96BD0 722 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 COQ10AQ96MF6 247 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 ZNF714Q96N38 554 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 MS4A4EQ96PG1 132 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 OR2V2Q96R30 315 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 MMP28Q9H239 520 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 CREBZFQ9NS37 354 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 STARD5Q9NSY2 213 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 EXTL2Q9UBQ6 330 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 NDUFB9Q9Y6M9 179 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 A3GALT2U3KPV4 340 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 TRPM6Q9BX84 2022 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 LRRC10BA6NIK2 292 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 CAPNS1P04632 268 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 PRSS1P07477 247 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 FGF5P12034 268 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 FUT1P19526 365 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 MIPP30301 263 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 RPS10P46783 165 aaKnown RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 LGALS7P47929 136 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 CCR9P51686 369 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SNRPD2P62316 118 aaKnown RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 FAM3AP98173 230 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SLBPQ14493 270 aaKnown RBP eCLIP5.06□□□□□ -1.6
USF3-202ENST00000478658 SHHQ15465 462 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 NCR3LG1Q68D85 454 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 NPAS3Q8IXF0 933 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 FBXL14Q8N1E6 418 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 TMEM190Q8WZ59 177 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 TRMT61AQ96FX7 289 aaKnown RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 PIP5K1AQ99755 562 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SLC25A21Q9BQT8 299 aaPredicted RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 SLCO1B1Q9Y6L6 691 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 INSRRP14616 1297 aa5.05□□□□□ -1.6
USF3-202ENST00000478658 TNFSF9P41273 254 aa5.05□□□□□ -1.6
USF3-202ENST00000478658 OR2B8PP59922 312 aa5.05□□□□□ -1.6
USF3-202ENST00000478658 ZNF85Q03923 595 aa5.05□□□□□ -1.6
USF3-202ENST00000478658 ZP2Q05996 745 aa5.05□□□□□ -1.6
USF3-202ENST00000478658 FAM26DQ5JW98 314 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms