RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-204	ENST00000474025	GSPT2	Q8IYD1	628 aa	Known RBP	4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	CADM2	Q8N3J6	435 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	SIGLECL1	Q8N7X8	197 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	PIK3C3	Q8NEB9	887 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	MFSD8	Q8NHS3	518 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	STK35	Q8TDR2	534 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	TESC	Q96BS2	214 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	C1orf147	Q96MC9	270 aa	Predicted RBP	4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	CCDC115	Q96NT0	180 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	OXGR1	Q96P68	337 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	DUX5	Q96PT3	197 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	SLC35A5	Q9BS91	424 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	C1QTNF5	Q9BXJ0	243 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	DPY30	Q9C005	99 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	MTHFD2L	Q9H903	347 aa	Predicted RBP	4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	MED29	Q9NX70	200 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	MKS1	Q9NXB0	559 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	DUSP13	Q9UII6	198 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	PRDM4	Q9UKN5	801 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	ZNF346	Q9UL40	294 aa	Known RBP	4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	CHST2	Q9Y4C5	530 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	NOX1	Q9Y5S8	564 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	ARHGAP32	A7KAX9	2087 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	DSPP	Q9NZW4	1301 aa		4.37	□□□□□ -1.71
SNRNP40-204	ENST00000474025	SACS	Q9NZJ4	4579 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	IGLV3-9	A0A075B6K5	115 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	LOC102725191	A0A1B0GVB3	256 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	CCDC154	A6NI56	674 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	SMIM23	A6NLE4	172 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	C17orf100	A8MU93	164 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	CLDN25	C9JDP6	229 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	FAM229A	H3BQW9	127 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025		M0R3G1	203 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	AIM2	O14862	343 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	CLPTM1	O96005	669 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	RNASE1	P07998	156 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	NUDT17	P0C025	328 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	NR2F1	P10589	423 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	B4GALT1	P15291	398 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	ZNF250	P15622	560 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	NCF2	P19878	526 aa	Predicted RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	GTF2E2	P29084	291 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	SERPINB5	P36952	375 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	RPS5	P46782	204 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	GIPR	P48546	466 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	PTDSS1	P48651	473 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	AQP5	P55064	265 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	COPZ1	P61923	177 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	RAB1A	P62820	205 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	IL13RA1	P78552	427 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	CCL8	P80075	99 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	TXNL4A	P83876	142 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	GALK2	Q01415	458 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	PIGF	Q07326	219 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	C1D	Q13901	141 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	MFSD13A	Q14CX5	517 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	NKPD1	Q17RQ9	610 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	SMU1	Q2TAY7	513 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	PCGF3	Q3KNV8	242 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	ALKBH6	Q3KRA9	238 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	MMEL1	Q495T6	779 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	GLIPR1L2	Q4G1C9	344 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	LIN52	Q52LA3	116 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	RNF220	Q5VTB9	566 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	ATG16L1	Q676U5	607 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	TMEM154	Q6P9G4	183 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	RBMS3	Q6XE24	437 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	ZNF813	Q6ZN06	617 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	SERPINA11	Q86U17	422 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	ZNF584	Q8IVC4	421 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	WDFY1	Q8IWB7	410 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	PEX5L	Q8IYB4	626 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	C20orf196	Q8IYI0	205 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	CLIP4	Q8N3C7	705 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	SYT14	Q8NB59	555 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	DEFB108B	Q8NET1	73 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	VPS37A	Q8NEZ2	397 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	OR52P1P	Q8NH57	321 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	PNPT1	Q8TCS8	783 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	MGARP	Q8TDB4	240 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	EPS8L3	Q8TE67	593 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	TAF15	Q92804	592 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	TAAR8	Q969N4	342 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	SLC25A36	Q96CQ1	311 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	KTI12	Q96EK9	354 aa	Predicted RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	APOPT1	Q96IL0	206 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	LRR1	Q96L50	414 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	ZNF48	Q96MX3	618 aa	Predicted RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	ZIM3	Q96PE6	472 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	TSPAN32	Q96QS1	320 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	SLITRK2	Q9H156	845 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	C7orf69	Q9H7B7	122 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	AKTIP	Q9H8T0	292 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	ZMAT3	Q9HA38	289 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	HINT3	Q9NQE9	182 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	NKIRAS2	Q9NYR9	191 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	TAAR3P	Q9P1P4	343 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	SLC17A7	Q9P2U7	560 aa		4.36	□□□□□ -1.71
SNRNP40-204	ENST00000474025	SLC7A8	Q9UHI5	535 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 98 ms