RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ZNF584Q8IVC4 421 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 MMGT1Q8N4V1 131 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 NPEPL1Q8NDH3 523 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 TSEN15Q8WW01 171 aaKnown RBP5.26□□□□□ -1.57
HDAC3-206ENST00000471968 C17orf50Q8WW18 174 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 SAMD8Q96LT4 415 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 PITX2Q99697 317 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 NABP2Q9BQ15 211 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 WACQ9BTA9 647 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 LINC00470Q9BZP3 86 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 GPR35Q9HC97 309 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 GIMAP4Q9NUV9 329 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 CHRNA9Q9UGM1 479 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 FAT4Q6V0I7 4981 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 A0A087WV62 115 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 ZNF99A8MXY4 864 aaPredicted RBP5.25□□□□□ -1.57
HDAC3-206ENST00000471968 H3BNH8 94 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 RPL36A-HNRNPH2H7BZ11 118 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 RNASET2O00584 256 aaKnown RBP5.25□□□□□ -1.57
HDAC3-206ENST00000471968 CYP7B1O75881 506 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 KCNK2O95069 426 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 CYB5R3P00387 301 aaPredicted RBP5.25□□□□□ -1.57
HDAC3-206ENST00000471968 ZSCAN5DPP0CG00 497 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 IGHV4-30-4P0DP06 118 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 NTSP30990 170 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 MPIP34949 423 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 UCP2P55851 309 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 BLCAPP62952 87 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 BASP1P80723 227 aaKnown RBP5.25□□□□□ -1.57
HDAC3-206ENST00000471968 GALNT1Q10472 559 aaPredicted RBP5.25□□□□□ -1.57
HDAC3-206ENST00000471968 ZNF460Q14592 562 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 CPSF6Q16630 551 aaKnown RBP eCLIP5.25□□□□□ -1.57
HDAC3-206ENST00000471968 ZNF260Q3ZCT1 412 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 CDONQ4KMG0 1287 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 SULT1C3Q6IMI6 304 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 C11orf63Q6NUN7 778 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 LRIG3Q6UXM1 1119 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 FRMD7Q6ZUT3 714 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 COMMD6Q7Z4G1 85 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 TMEM99Q8N816 258 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 ZNF614Q8N883 585 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 C2CD4AQ8NCU7 369 aaPredicted RBP5.25□□□□□ -1.57
HDAC3-206ENST00000471968 SLC30A7Q8NEW0 376 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 OR1J1Q8NGS3 322 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 TRPC4APQ8TEL6 797 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 ST8SIA1Q92185 356 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 RNFT2Q96EX2 444 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 LYZL4Q96KX0 146 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 FRG2BQ96QU4 278 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 SERPINI1Q99574 410 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 THUMPD3Q9BV44 507 aaKnown RBP5.25□□□□□ -1.57
HDAC3-206ENST00000471968 SF3B5Q9BWJ5 86 aaKnown RBP5.25□□□□□ -1.57
HDAC3-206ENST00000471968 ACTRT3Q9BYD9 372 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 BCL2L14Q9BZR8 327 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 SLC19A3Q9BZV2 496 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 CDH20Q9HBT6 801 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 A4GALTQ9NPC4 353 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 CTPS2Q9NRF8 586 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 CYSLTR2Q9NS75 346 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 C20orf141Q9NUB4 165 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 GIN1Q9NXP7 522 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 NDE1Q9NXR1 346 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 AHSPQ9NZD4 102 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 KIAA1456Q9P272 454 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 TRAPPC4Q9Y296 219 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 VWA7Q9Y334 891 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 VPS13BQ7Z7G8 4022 aa5.25□□□□□ -1.57
HDAC3-206ENST00000471968 EPM2AB3EWF7 344 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 H0YIV9 168 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 OR10H3O60404 316 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 AKR7A3O95154 331 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 AHSGP02765 367 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 SERPINA5P05154 406 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 JUNP05412 331 aaKnown RBP5.24□□□□□ -1.57
HDAC3-206ENST00000471968 SNRNP70P08621 437 aaKnown RBP5.24□□□□□ -1.57
HDAC3-206ENST00000471968 PATE4P0C8F1 98 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 PRB4P10163 310 aaPredicted RBP5.24□□□□□ -1.57
HDAC3-206ENST00000471968 TNFSF4P23510 183 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 STIP1P31948 543 aaKnown RBP5.24□□□□□ -1.57
HDAC3-206ENST00000471968 LIPAP38571 399 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 HTR5AP47898 357 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 NCBP2P52298 156 aaKnown RBP eCLIP5.24□□□□□ -1.57
HDAC3-206ENST00000471968 SLC18A3Q16572 532 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 SRSF7Q16629 238 aaKnown RBP eCLIP5.24□□□□□ -1.57
HDAC3-206ENST00000471968 HAGHQ16775 308 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 PLA1AQ53H76 456 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 ZMAT1Q5H9K5 638 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 FAM201AQ5SY85 155 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 THEM4Q5T1C6 240 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.24□□□□□ -1.57
HDAC3-206ENST00000471968 FAM27D1Q5T7N8 215 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 TMEM225Q6GV28 225 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 DRICH1Q6PGQ1 229 aaPredicted RBP5.24□□□□□ -1.57
HDAC3-206ENST00000471968 CREB3L2Q70SY1 520 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 TMEM219Q86XT9 240 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 OR2L13Q8N349 312 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 L3MBTL4Q8NA19 623 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 SYT8Q8NBV8 401 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 ANKK1Q8NFD2 765 aa5.24□□□□□ -1.57
HDAC3-206ENST00000471968 OR5M8Q8NGP6 311 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms