RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CA13Q8N1Q1 262 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 AGBL5Q8NDL9 886 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 LRFN5Q96NI6 719 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 PBDC1Q9BVG4 233 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 PBX4Q9BYU1 374 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 MUTYHQ9UIF7 546 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 ADAM18Q9Y3Q7 739 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 F8W036 122 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 SERPINA2P20848 420 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 BLOC1S1P78537 153 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 SORDQ00796 357 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 GPR176Q14439 515 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 ZMYND11Q15326 602 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 PRSS36Q5K4E3 855 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 TMEM215Q68D42 235 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 LINC00346Q8IVM7 164 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 EID2Q8N6I1 236 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 FAM3DQ96BQ1 224 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 OR6C1Q96RD1 312 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 SPIN2AQ99865 258 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 SPIN2BQ9BPZ2 258 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 ZNF576Q9H609 170 aa13.57□□□□□ -0.24
PTPRU-205ENST00000460170 FASLGP48023 281 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 PRAMEF20Q5VT98 475 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 SULF2Q8IWU5 870 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 FAM109AQ8N4B1 249 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 ZNF611Q8N823 705 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 TMEM185AQ8NFB2 350 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 EMC7Q9NPA0 242 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 REV1Q9UBZ9 1251 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 TPT1P13693 172 aaKnown RBP13.56□□□□□ -0.24
PTPRU-205ENST00000460170 POU3F2P20265 443 aaPredicted RBP13.56□□□□□ -0.24
PTPRU-205ENST00000460170 DIO1P49895 249 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 MPEG1Q2M385 716 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 FCRL6Q6DN72 434 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 LCN10Q6JVE6 187 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 ZNF585AQ6P3V2 769 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 GRINAQ7Z429 371 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 BCORP1Q8N888 145 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 OR5H6Q8NGV6 325 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 SMAP2Q8WU79 429 aaPredicted RBP13.56□□□□□ -0.24
PTPRU-205ENST00000460170 ARSGQ96EG1 525 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 QSER1Q2KHR3 1735 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 ZNF831Q5JPB2 1677 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 ANKRD31Q8N7Z5 1873 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 A0A1B0GX78 115 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 OPCMLQ14982 345 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 CLVS2Q5SYC1 327 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 STEAP1BQ6NZ63 245 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 TMEM43Q9BTV4 400 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 DNTTIP1Q9H147 329 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 KCNIP1Q9NZI2 227 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 A4GNTQ9UNA3 340 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 hCG_1807616A0A1W2PRN6 198 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 SLC33A1O00400 549 aaPredicted RBP13.56□□□□□ -0.24
PTPRU-205ENST00000460170 ZNF749O43361 778 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 TBX19O60806 448 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 TSPAN15O95858 294 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 IFNA2P01563 188 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 CD79AP11912 226 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 SPI1P17947 270 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 CAV2P51636 162 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 PRSS45Q7RTY3 260 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 ULBP3Q9BZM4 244 aa13.56□□□□□ -0.24
PTPRU-205ENST00000460170 LRRC37AA6NMS7 1700 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 NFYAP23511 347 aaPredicted RBP13.55□□□□□ -0.24
PTPRU-205ENST00000460170 GDF1P27539 372 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 OR1D5P58170 312 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 GLYATL3Q5SZD4 288 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 C8orf82Q6P1X6 216 aaPredicted RBP13.55□□□□□ -0.24
PTPRU-205ENST00000460170 CMTM1Q8IZ96 169 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 OR56B1Q8NGI3 324 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 OR6M1Q8NGM8 313 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 WDR34Q96EX3 536 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 TMEM59Q9BXS4 323 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 MCTS1Q9ULC4 181 aaKnown RBP13.55□□□□□ -0.24
PTPRU-205ENST00000460170 HOXB9P17482 250 aaPredicted RBP13.55□□□□□ -0.24
PTPRU-205ENST00000460170 SRP9P49458 86 aaKnown RBP13.55□□□□□ -0.24
PTPRU-205ENST00000460170 EVX1P49640 407 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 HCCSP53701 268 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 YBX1P67809 324 aaKnown RBP13.55□□□□□ -0.24
PTPRU-205ENST00000460170 PRDM7Q9NQW5 492 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 P2RY10O00398 339 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 PRSS23O95084 383 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 UBCP0CG48 685 aaKnown RBP13.55□□□□□ -0.24
PTPRU-205ENST00000460170 CLDN17P56750 224 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 RPL27P61353 136 aaKnown RBP13.55□□□□□ -0.24
PTPRU-205ENST00000460170 CD276Q5ZPR3 534 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 C12orf73Q69YU5 71 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 SYS1Q8N2H4 156 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 FYTTD1Q96QD9 318 aaKnown RBP13.55□□□□□ -0.24
PTPRU-205ENST00000460170 SLIRPQ9GZT3 109 aaKnown RBP13.55□□□□□ -0.24
PTPRU-205ENST00000460170 C20orf85Q9H1P6 137 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 CDH20Q9HBT6 801 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 EHFQ9NZC4 300 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 M0R082 166 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 CLDN6P56747 220 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 PCBD1P61457 104 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 SLC35A1P78382 337 aa13.55□□□□□ -0.24
PTPRU-205ENST00000460170 ZNF695Q8IW36 515 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms