RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 AJUBAQ96IF1 538 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 FOXN4Q96NZ1 517 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 OR52B2Q96RD2 323 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 VRK1Q99986 396 aaPredicted RBP4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 AMBRA1Q9C0C7 1298 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 SEC61A2Q9H9S3 476 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 TPT1P8Q9HAU6 139 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 BARX1Q9HBU1 254 aaPredicted RBP4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 TMEM45AQ9NWC5 275 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 PARPBPQ9NWS1 579 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 MALT1Q9UDY8 824 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF443Q9Y2A4 671 aaPredicted RBP4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC9A8Q9Y2E8 581 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 IGHV1-18A0A0C4DH31 117 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 LRP5LA4QPB2 252 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 AQP7P3A6NL99 342 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 TRPC5OSA6NMA1 111 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 A8MVM7 634 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 CLIC1O00299 241 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 HDAC3O15379 428 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 PHF1O43189 567 aaPredicted RBP4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 DNPH1O43598 174 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 TPST1O60507 370 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 SNNO75324 88 aaPredicted RBP4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC22A3O75751 556 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 SEC14L2O76054 403 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 TOX4O94842 621 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 KRT75O95678 551 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 IFNA2P01563 188 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 IL6P05231 212 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 OR4A8P0C604 315 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 IGHV4-31P0DP07 118 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 NCF2P19878 526 aaPredicted RBP4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 USF1P22415 310 aaPredicted RBP4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 CALCRP30988 508 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 SERPINF1P36955 418 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 POLR2JP52435 117 aaKnown RBP4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 EFNA4P52798 201 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 AQP5P55064 265 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 CLDN17P56750 224 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 DSCR9P59020 149 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 DSTNP60981 165 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 COPZ1P61923 177 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 ARF1P84077 181 aaKnown RBP4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 TGFBR3Q03167 851 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 EGR4Q05215 589 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 CHRNB3Q05901 458 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 LOXL1Q08397 574 aaPredicted RBP4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 GNA13Q14344 377 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 GALEQ14376 348 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 GGTLC2Q14390 218 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 RGNQ15493 299 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 GSTA3Q16772 222 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 RNF151Q2KHN1 245 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 TBRG1Q3YBR2 411 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 GLIPR1L2Q4G1C9 344 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 IQCCQ4KMZ1 466 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF311Q5JNZ3 666 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 PHYHD1Q5SRE7 291 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 C6orf10Q5SRN2 563 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 C6orf52Q5T4I8 152 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 C1orf140Q5VVS0 124 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 PRAMEF8Q5VWM4 474 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 PRAMEF7Q5VXH5 474 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 WBP2NLQ6ICG8 309 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF544Q6NX49 715 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC2A7Q6PXP3 512 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 MYPOPQ86VE0 399 aaPredicted RBP4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 COMTD1Q86VU5 262 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 LRRC34Q8IZ02 419 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 C10orf111Q8N326 155 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 KLHL36Q8N4N3 616 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 POMGNT2Q8NAT1 580 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 OR1K1Q8NGR3 316 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 C10orf105Q8TEF2 133 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 SNX33Q8WV41 574 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 STON2Q8WXE9 905 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 BCL2L2Q92843 193 aaPredicted RBP4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 TAAR8Q969N4 342 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 TMEM45BQ96B21 275 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 KTI12Q96EK9 354 aaPredicted RBP4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 TMEM19Q96HH6 336 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 SORCS2Q96PQ0 1159 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 ALKBH3Q96Q83 286 aaPredicted RBP4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC38A2Q96QD8 506 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 ZBTB18Q99592 522 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 WFDC6Q9BQY6 131 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 SF3B5Q9BWJ5 86 aaKnown RBP4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 TAPBPLQ9BX59 468 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 BEX2Q9BXY8 128 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 CHODLQ9H9P2 273 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 FKRPQ9H9S5 495 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 THAP1Q9NVV9 213 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 P2RX2Q9UBL9 471 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 AMDHD2Q9Y303 409 aa4.07□□□□□ -1.76
GTF3C3-208ENST00000455546 DSPPQ9NZW4 1301 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 COL6A5A8TX70 2615 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 IGHV4-61A0A0C4DH41 118 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 A0A0G2JPF8 293 aa4.06□□□□□ -1.76
GTF3C3-208ENST00000455546 TMEM129A0AVI4 362 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms