RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 EPXP11678 715 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SRFP11831 508 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ST6GAL1P15907 406 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 HOXA5P20719 270 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SLC6A4P31645 630 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 BRS3P32247 399 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 RFX2P48378 723 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 RPL23AP62750 156 aaKnown RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 YBX1P67809 324 aaKnown RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 EGR4Q05215 589 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 PRKCDQ05655 676 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 CTF1Q16619 201 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ASTE1Q2TB18 679 aaPredicted RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 CBWD6Q4V339 395 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 XKR7Q5GH72 579 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 TEDDM1Q5T9Z0 273 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 C9orf135Q5VTT2 229 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 WDR25Q64LD2 544 aaPredicted RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SAXO2Q658L1 398 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 OR52W1Q6IF63 320 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 FAM45BPQ6NSW5 357 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 FAAP20Q6NZ36 180 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ZNF773Q6PK81 442 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 LCLAT1Q6UWP7 414 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ACOT7LQ6ZUV0 252 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 PRSS48Q7RTY5 328 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 LINC01551Q86U37 167 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 IFNEQ86WN2 208 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 PTOV1Q86YD1 416 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 MTURNQ8N3F0 131 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 PARP16Q8N5Y8 322 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 OR56A1Q8NGH5 318 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 OR4P4Q8NGL7 312 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SHKBP1Q8TBC3 707 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ORAOV1Q8WV07 137 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ZNF480Q8WV37 535 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ITCHQ96J02 903 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SPATA33Q96N06 139 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 OR52E6Q96RD3 313 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 TNFRSF13CQ96RJ3 184 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 NODALQ96S42 347 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 MCRIP2Q9BUT9 160 aaKnown RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ULBP2Q9BZM5 246 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 MMP28Q9H239 520 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 FAM96AQ9H5X1 160 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 GBA2Q9HCG7 927 aaPredicted RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SMPD4Q9NXE4 827 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SLC25A10Q9UBX3 287 aaPredicted RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SERTAD3Q9UJW9 196 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SLC35A3Q9Y2D2 325 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 LAMB2P55268 1798 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 LOC102724200A0A096LPH7 203 aaPredicted RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 NPIPA5A0A0B4J1W7 369 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 IQCMA0A1B0GVH7 501 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ATP6AP2A0A1C7CYW4 349 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 F5H5T6 163 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 M0R233 179 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 UBFD1O14562 309 aaKnown RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 RDH16O75452 317 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 TRUB2O95900 331 aaKnown RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 BCHEP06276 602 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 RAB40ALP0C0E4 278 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 GABRB1P18505 474 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ACKR3P25106 362 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ITPKBP27987 946 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SOAT1P35610 550 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 RAB7AP51149 207 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 KCNQ1P51787 676 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 PDE7AQ13946 482 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 TSNQ15631 228 aaKnown RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 PLPPR5Q32ZL2 321 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ACSM3Q53FZ2 586 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 UNC50Q53HI1 259 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 Q6ZNB5 142 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SLC47A2Q86VL8 602 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 FAM219AQ8IW50 185 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ZNF664Q8N3J9 261 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 ACBD7Q8N6N7 88 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 NECAP1Q8NC96 275 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 CADM4Q8NFZ8 388 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 TFB1MQ8WVM0 346 aaKnown RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 TNFAIP8L1Q8WVP5 186 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 DNASE1L2Q92874 299 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SMARCD2Q92925 531 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 TAAR8Q969N4 342 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 TM4SF19Q96DZ7 209 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 COQ10AQ96MF6 247 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 RDH12Q96NR8 316 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 OR2A14Q96R47 310 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 TP53RKQ96S44 253 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SLIRPQ9GZT3 109 aaKnown RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 WNT10AQ9GZT5 417 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 MEGF9Q9H1U4 602 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 DHX35Q9H5Z1 703 aaKnown RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 RNF121Q9H920 327 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 TRIM36Q9NQ86 728 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 HEYLQ9NQ87 328 aaPredicted RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 CBLN4Q9NTU7 201 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 NECAP2Q9NVZ3 263 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms