RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 C6orf89Q6UWU4 347 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 BZW1Q7L1Q6 419 aaKnown RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 MARCH3Q86UD3 253 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 CALHM3Q86XJ0 350 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 NKAPQ8N5F7 415 aaKnown RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 ZNF527Q8NB42 609 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 OR4C13Q8NGP0 309 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 RP9Q8TA86 221 aaKnown RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 WIPF2Q8TF74 440 aaPredicted RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 XAGE5Q8WWM1 108 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 RAB40AQ8WXH6 277 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 CDKL2Q92772 493 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 CPNE4Q96A23 557 aaPredicted RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 APH1AQ96BI3 265 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 EFHD2Q96C19 240 aaPredicted RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 NEURL3Q96EH8 262 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 GIMAP5Q96F15 307 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 CFAP36Q96G28 342 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 RNF145Q96MT1 663 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 DDOQ99489 341 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 NABP2Q9BQ15 211 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 SORBS1Q9BX66 1292 aaKnown RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 HAUS4Q9H6D7 363 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 PELI2Q9HAT8 420 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 PATZ1Q9HBE1 687 aaKnown RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 ATAD3AQ9NVI7 634 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 PCDHGB4Q9UN71 923 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 DTNAQ9Y4J8 743 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 IGHV2OR16-5A0A0B4J2B6 119 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 LOC105371267A0A1B0GV96 52 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 BTBD17A6NE02 478 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 LDLRAD4O15165 306 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 TO15178 435 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 ACOX3O15254 700 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 CD3EAPO15446 510 aaKnown RBP3.97□□□□□ -1.77
SDCBP-205ENST00000447267 TSPAN2O60636 221 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 SMIM24O75264 130 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 INMTO95050 263 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 SCELO95171 688 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 GPR75O95800 540 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 S100A6P06703 90 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 QDPRP09417 244 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 NPSP0C0P6 89 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 NT5EP21589 574 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 S100A1P23297 94 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 ATP5A1P25705 553 aaKnown RBP3.97□□□□□ -1.77
SDCBP-205ENST00000447267 PSMA4P25789 261 aaKnown RBP3.97□□□□□ -1.77
SDCBP-205ENST00000447267 CNTFRP26992 372 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 ALDH3A1P30838 453 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 GNALP38405 381 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 DSTNP60981 165 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 PRAMEP78395 509 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 WHAMMP3Q1A5X7 153 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 ASTE1Q2TB18 679 aaPredicted RBP3.97□□□□□ -1.77
SDCBP-205ENST00000447267 TMEM176BQ3YBM2 270 aaPredicted RBP3.97□□□□□ -1.77
SDCBP-205ENST00000447267 CPTPQ5TA50 214 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 SERTAD4-AS1Q5TG53 156 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 METTL11BQ5VVY1 283 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 UGT3A1Q6NUS8 523 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 KLHL24Q6TFL4 600 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 TMPRSS11BQ86T26 416 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 SPARTQ8N0X7 666 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 MPP5Q8N3R9 675 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 TEX9Q8N6V9 391 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 ACOT4Q8N9L9 421 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 SCCPDHQ8NBX0 429 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 DYDC1Q8WWB3 177 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 C16orf45Q96MC5 204 aaPredicted RBP3.97□□□□□ -1.77
SDCBP-205ENST00000447267 TSPAN32Q96QS1 320 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 NKX3-1Q99801 234 aaPredicted RBP3.97□□□□□ -1.77
SDCBP-205ENST00000447267 AIF1LQ9BQI0 150 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 PELOQ9BRX2 385 aaKnown RBP3.97□□□□□ -1.77
SDCBP-205ENST00000447267 WACQ9BTA9 647 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 DCTN5Q9BTE1 182 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 TRIM15Q9C019 465 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 HIPK2Q9H2X6 1198 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 INIPQ9NRY2 104 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 LYARQ9NX58 379 aaKnown RBP3.97□□□□□ -1.77
SDCBP-205ENST00000447267 KLHL9Q9P2J3 617 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 IL20RAQ9UHF4 553 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 BCAP29Q9UHQ4 241 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 ATPIF1Q9UII2 106 aa3.97□□□□□ -1.77
SDCBP-205ENST00000447267 DNAH17Q9UFH2 4485 aa3.96□□□□□ -1.77
SDCBP-205ENST00000447267 IGHV1-69DA0A0B4J2H0 117 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 KIR2DS1A0A191URI9 304 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 A0A1W2PPW3 197 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 TCRBV4S1A1TA0A5B7 111 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF724A8MTY0 619 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 A8MXK9 166 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 EPM2AB3EWF7 344 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 TMEM233B4DJY2 109 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 H3BMM5 538 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 H3BQF6 201 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 AP4M1O00189 453 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 AP3B1O00203 1094 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 EBAG9O00559 213 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 BIRC5O15392 142 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 FADS1O60427 444 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 PFDN1O60925 122 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 NDUFS3O75489 264 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms