RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 SLC2A12Q8TD20 617 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 LKAAEAR1Q8TD35 194 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 ZMAT3Q9HA38 289 aaKnown RBP9.55□□□□□ -0.88
LIN54-202ENST00000442461 DMRT3Q9NQL9 472 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 KLHL42Q9P2K6 505 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 CHRNA9Q9UGM1 479 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 PPT2Q9UMR5 302 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 RHBDD3Q9Y3P4 386 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 TRAV27A0A087WT01 109 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 ZNF727A8MUV8 499 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 HPNP05981 417 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 PRF1P14222 555 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 ABOP16442 354 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 GDI1P31150 447 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 DUSP28Q4G0W2 176 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 Q5BKY6 102 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 OR5AP2Q8NGF4 316 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 OR6T1Q8NGN1 323 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 HOXB13Q92826 284 aaPredicted RBP9.55□□□□□ -0.88
LIN54-202ENST00000442461 GCDHQ92947 438 aaPredicted RBP9.55□□□□□ -0.88
LIN54-202ENST00000442461 SCAMP4Q969E2 229 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 FBXO17Q96EF6 278 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 SCLYQ96I15 445 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 SLC41A2Q96JW4 573 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 SGPP1Q9BX95 441 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 RRAGCQ9HB90 399 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 OPN4Q9UHM6 478 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 SLC7A11Q9UPY5 501 aa9.55□□□□□ -0.88
LIN54-202ENST00000442461 OR5H15A6NDH6 313 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 OR5H1A6NKK0 313 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 CEBPZOSA8MTT3 80 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 GALP22466 123 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 SUOXP51687 545 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 TAS2R60P59551 318 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 SPCS3P61009 180 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 HIST1H3AP68431 136 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 DHCR24Q15392 516 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 SLC25A35Q3KQZ1 300 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 PRRT3Q5FWE3 981 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 PABPC1L2AQ5JQF8 200 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 CTSL3PQ5NE16 218 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 FAM27D1Q5T7N8 215 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 NSUN5P2Q63ZY6 315 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 SBSNQ6UWP8 590 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 SEZ6L2Q6UXD5 910 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 RNF180Q86T96 592 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 CALHM3Q86XJ0 350 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 RNF113BQ8IZP6 322 aaKnown RBP9.54□□□□□ -0.88
LIN54-202ENST00000442461 LRRC25Q8N386 305 aaPredicted RBP9.54□□□□□ -0.88
LIN54-202ENST00000442461 L3MBTL4Q8NA19 623 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 DYRK2Q92630 601 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 FAM210BQ96KR6 192 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 ZNF75AQ96N20 296 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 MAP3K3Q99759 626 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 METTL9Q9H1A3 318 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 SLC35B3Q9H1N7 401 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 GHITMQ9H3K2 345 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 B3GAT2Q9NPZ5 323 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 MDFIC2A0A1B0GVS7 189 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 SLC38A8A6NNN8 435 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 LATO43561 262 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 FBP1P09467 338 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 AOAHP28039 575 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 P2RX1P51575 399 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 CASP6P55212 293 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 PPIAP62937 165 aaKnown RBP9.54□□□□□ -0.88
LIN54-202ENST00000442461 RING1Q06587 406 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 GUCA2BQ16661 112 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 TMEM183BQ1AE95 376 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 TMEM35AQ53FP2 167 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 PLA1AQ53H76 456 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 TMEM182Q6ZP80 229 aaPredicted RBP9.54□□□□□ -0.88
LIN54-202ENST00000442461 MBOAT2Q6ZWT7 520 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 ARRDC2Q8TBH0 407 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 SLC22A18Q96BI1 424 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 TMPRSS13Q9BYE2 586 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 IL26Q9NPH9 171 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 HINT3Q9NQE9 182 aaKnown RBP9.54□□□□□ -0.88
LIN54-202ENST00000442461 SLC39A9Q9NUM3 307 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 RASL12Q9NYN1 266 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 USP3Q9Y6I4 520 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 LMO7Q8WWI1 1683 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 TBC1D3KA0A087X1G2 549 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 TBC1D3FA6NER0 549 aaPredicted RBP9.54□□□□□ -0.88
LIN54-202ENST00000442461 CLDN34H7C241 214 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 TMEM127O75204 238 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 GP1BBP13224 206 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 CASRP41180 1078 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 MVDP53602 400 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 DECR1Q16698 335 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 PHYHD1Q5SRE7 291 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 TBC1D3GQ6DHY5 549 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 ZNF620Q6ZNG0 422 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 LYG2Q86SG7 212 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 PTOV1Q86YD1 416 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 MUC20Q8N307 709 aaPredicted RBP9.54□□□□□ -0.88
LIN54-202ENST00000442461 ZNF808Q8N4W9 903 aaPredicted RBP9.54□□□□□ -0.88
LIN54-202ENST00000442461 ADPRHL1Q8NDY3 354 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 OR13C8Q8NGS7 320 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 EDAQ92838 391 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms